Aquitalea sp. USM4: DKK66_14555
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Entry
DKK66_14555 CDS
T05865
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
aqs
Aquitalea sp. USM4
Pathway
aqs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DKK66_14555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqs03400
]
DKK66_14555
Enzymes [BR:
aqs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
DKK66_14555
DNA repair and recombination proteins [BR:
aqs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DKK66_14555
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DKK66_14555
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DKK66_14555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
TMP_4
Motif
Other DBs
NCBI-ProteinID:
QBJ79189
UniProt:
A0A4P6TM54
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All DBs
Position
complement(3160534..3161961)
Genome browser
AA seq
475 aa
AA seq
DB search
MHTFFWHDYETFGAVPRQDRPSQFAGVRTDAELNEIGEPVMLYCQPAPDYLPAPEACLLT
GITPQHCLQHGVAEHEFAAVIERELAAPGTIGVGYNTLRFDDEVSRFLFWRNLIDPYARE
WQNQCGRWDILDLVRATYALRPEGIEWPQHEDGRPSFKLEHLSAANGLLHEAAHDALSDV
RATIALARLIRQKQPKLFDYYLSLRKKDAVKAQLNLHKPQPLLHISGMYGAERGNLAIVW
PLAQHPTNSNEVIVWDLAFDPAMLRGLSADDIRQRIYTRTEELPEGITRLPLKTIHINKS
PFVVANLKVLGADRAAHWGVDMVQIQQHAASAAALPDLSHTWRQVYRREAGEPRDVDENL
YGGFVSNNDRKVLNKLRLKSAAQLTGEMAFFEDAQLGELLFRYRARNFPSSLSDEESQRW
RDWCQHKLQDGVGGRNLAQFQQEMAAVRERELTPAQQDILQQLDNYAASLLAPQP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcatacattcttctggcacgactatgaaaccttcggcgccgtgccgcgccaggaccgc
ccctcgcaatttgccggggtacgtaccgatgccgagctgaacgaaatcggcgaacccgtc
atgctgtactgccagcccgcgccagactacctgcccgcaccggaagcctgcctgctcacc
ggcatcaccccgcagcactgcctgcaacacggagtggccgagcatgagttcgccgcggtg
atcgaacgcgaactggccgcccccggcaccatcggcgtgggctacaacacactgcgcttt
gacgatgaagtcagccgctttctgttctggcgcaacctgatcgacccctatgcccgcgaa
tggcagaaccaatgcggccgctgggacattctggacctggtgcgcgccacctatgcgctg
cggccggaaggcattgaatggccacaacacgaagacggccgccccagtttcaaactggaa
cacctgtccgccgccaatggcctgctgcacgaagccgcccacgacgcgctgtccgatgtg
cgcgccaccattgccctggcgcggctgatcaggcaaaagcagcccaagctgttcgactat
tacctcagcctgcgcaagaaagacgcggtaaaggcacaactgaacctgcacaaaccgcag
ccgctactgcacatctccggcatgtacggtgccgagcgcggcaatctggccattgtctgg
ccgctggcccagcaccccaccaacagcaatgaagtgattgtatgggacctggccttcgac
ccggccatgctgcgcggcctgagtgccgacgacatccgccagcgtatctacacccgcacc
gaagagctgccggaaggtattacacggctgccgctcaagaccatccacatcaacaaatcg
ccctttgtcgtggccaacctcaaggtactgggtgcagaccgggcagcgcactggggcgtg
gacatggtgcagatacaacagcacgccgccagcgccgccgccctgcccgacctcagccac
acctggcggcaggtgtatcgccgcgaagcgggcgagccgcgcgatgtggacgaaaacctg
tacggcggctttgtcagcaataacgaccgcaaggtgctgaacaagctgcgactgaaatcc
gccgcccaactgacgggcgagatggcctttttcgaagacgcccaactgggtgaattgctg
ttccgctaccgcgcacgcaacttccccagcagcctgtcagatgaagaaagccagcgctgg
cgcgactggtgccagcacaagctgcaggatggcgtgggcgggcgcaacctggcgcagttc
cagcaggaaatggccgccgtacgcgagcgcgagctgacaccggcccaacaggacatcctg
caacagctggacaactacgccgccagcctgctggcgccacagccgtaa
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