Aquitalea sp. USM4: DKK66_15585
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Entry
DKK66_15585 CDS
T05865
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
aqs
Aquitalea sp. USM4
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aqs03009
]
DKK66_15585
Enzymes [BR:
aqs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DKK66_15585
Ribosome biogenesis [BR:
aqs03009
]
Prokaryotic type
rRNA helicases
DKK66_15585
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
Vts1
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QBJ80400
LinkDB
All DBs
Position
complement(3378411..3379796)
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AA seq
461 aa
AA seq
DB search
MKKIAFSSLTALPEALLSNLDSLGYHSMTPIQAESLPVILDGRDLIAQAKTGSGKTAAFG
LGILANINPRWFAVQALVLCPTRELADQVAQEIRRLARSIDNIKVVTLTGGSPMGPQRAS
LEHGAHIVVGTPGRLQDHLYRESLNLAGVKTLVLDEADRMIDMGFIEEIVGIVRACPRQR
QTLLFSATYPDTIRKASAQFLRQPVEVKVEALHSGDHIEQWFYKVKPETRLETVTRILQH
VRPASALAFCNTKERCKELVKDLQSRGFSALALYGDLEQRDRDQILLRFANKSTTVLVAT
DVAARGLDIKELDLVINVDVSHDPEVHIHRIGRTGRGELHGLAMTLTCESDARRLVQIED
YQKAPLTWAEVDELTPAPGGQLIPAMVTLEIAGGKRDKLRPGDILGALTGDGGIAGSHVG
KINVLEGASFVALQRDIAQQAFEQLSVSKIKGRLFKMRFVE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaatcgccttttccagcctcaccgcgctgcctgaagccctgctctccaacctg
gacagcctcggttaccacagcatgacccccatccaggccgaaagcctgccggtgattctg
gacgggcgcgacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttcggc
cttggcatcctggccaacatcaacccgcgctggtttgccgtacaggcactggtgctgtgc
cccacccgcgaactggccgaccaggtggcacaggaaatccgccgactggcacgcagcatc
gacaatatcaaggtagtgaccctgaccggcggctcgccgatggggccgcagcgcgcctcg
ctggaacacggtgcacacatcgtggtgggcacgcctggccgtctgcaggatcacctgtac
cgcgaatcgctgaacctggccggggtgaaaaccctggtgctggacgaagccgaccgcatg
attgacatgggcttcatcgaggaaatcgtcggcatcgtgcgcgcctgcccgcgccagcgt
cagaccctgctgttctccgccacctatcccgacaccatccgcaaggccagcgcgcagttc
ctgcgtcagccggtggaagtgaaagtggaagcgctgcacagcggcgaccatatcgaacaa
tggttctacaaggtgaagccggaaacccggctggaaaccgtcacccgcatcctgcagcac
gtgcgcccggcttccgcgctggccttctgcaataccaaggaacgctgcaaggagctggtg
aaagacttgcaaagccgtggcttctccgcgctggcgctgtatggcgatctggaacagcgc
gaccgcgaccagatcctgctgcgctttgccaacaagagcaccaccgtgctggtagccacc
gacgtagccgcacgcgggctggacatcaaggaactggacctggtgatcaatgtggacgtg
agccacgacccggaagtgcacatccaccgcattggccgaaccggccgtggcgagttgcat
ggcctggccatgacactgacctgcgaaagcgatgcccgccgcctggtgcagattgaggac
taccagaaggccccgctcacctgggccgaagtggacgaactgaccccagcgccgggcggc
cagctgattccggccatggtgacgctggaaattgccggcggcaaacgtgacaagctgcgc
ccgggtgacattctgggcgcgctgactggtgacggcggcattgccggcagtcatgtgggc
aagatcaacgtgctggaaggtgccagctttgttgccctgcagcgcgacatcgcccagcaa
gctttcgagcagctgtcggtcagcaaaatcaaaggtcgcttgttcaagatgcgctttgtc
gaataa
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