KEGG   Aquitalea sp. USM4: DKK66_17440
Entry
DKK66_17440       CDS       T05865                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
aqs  Aquitalea sp. USM4
Brite
KEGG Orthology (KO) [BR:aqs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqs03032]
    DKK66_17440
   03036 Chromosome and associated proteins [BR:aqs03036]
    DKK66_17440
   03400 DNA repair and recombination proteins [BR:aqs03400]
    DKK66_17440
DNA replication proteins [BR:aqs03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DKK66_17440
Chromosome and associated proteins [BR:aqs03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DKK66_17440
DNA repair and recombination proteins [BR:aqs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DKK66_17440
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 Lmo2446-like_N
Other DBs
NCBI-ProteinID: QBJ79692
UniProt: A0A4P6TN61
LinkDB
Position
complement(3793612..3793887)
AA seq 91 aa
MTKQQLIAILSEKTGCSKVDVLRFMDALEQTIRDELVSGGEVTLASTGKFKVKNTAERNG
RNPKTGETVLIPAKRKVVFTPIKLLKEAVAG
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaccaaacaacaactcattgccatcctttccgaaaaaaccggctgcagcaaagtcgat
gtcctgcgcttcatggatgcgctggaacagaccattcgtgatgagctggtcagcggtggt
gaggtcacgctggccagtaccggcaagttcaaggtgaaaaatacggcggagcgcaatggc
cgcaatccgaaaaccggcgaaaccgtgctgatcccggcaaagcgcaaggtggtgttcacc
cccatcaagctgctgaaggaagccgtagccggctga

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