Radiobacillus deserti: FN924_02310
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Entry
FN924_02310 CDS
T06091
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aqt
Radiobacillus deserti
Pathway
aqt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FN924_02310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqt03019
]
FN924_02310
03009 Ribosome biogenesis [BR:
aqt03009
]
FN924_02310
Enzymes [BR:
aqt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FN924_02310
Messenger RNA biogenesis [BR:
aqt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FN924_02310
Ribosome biogenesis [BR:
aqt03009
]
Prokaryotic type
rRNA helicases
FN924_02310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Stimulus_sens_1
Motif
Other DBs
NCBI-ProteinID:
QDP39143
UniProt:
A0A516KCL0
LinkDB
All DBs
Position
435068..436534
Genome browser
AA seq
488 aa
AA seq
DB search
MTTFSSLGISKPVMKALEKMGFEEATPIQEQTIPLGLEGKDVIGQAQTGTGKTAAFGIPM
IEKIDKDIKKIQGLVIAPTRELAIQVGEEIHRLGQFKGIRTLPVYGGQHMDRQIRALKEG
PQIVVATPGRLLDHIRRKTINISNVHTAVLDEADEMLNMGFIDDIRDILKAIPEERQTLL
FSATMPKEIRDIGAKLMKKPEEVKIKAKEMTVENIDQHFIEVHEKQKFDTLTNLLDIHAP
TLAIIFGRTKKRVDEVTEGLHARGFRAEGIHGDLTQGKRMSVLNKFKNGRIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGRGGEAVSFITPRELPHLNLIEKVTK
GKIKRMQAPSMDEARRGQQQVTIDKLTSTIEKQELDAYRESATEILNQYDSVTVVAAALK
MLTKGGRRNAPVTLSSVAPVSVKPAYKDKNKKKFRGDNKRNFNRKGGKPQRNRKFQNKRG
KSNNFQSK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacatttagttcattaggcatttcaaaaccggtaatgaaggcattggaaaaaatg
ggatttgaagaagcaaccccaatccaagagcagactataccgctaggattagaaggaaaa
gacgtgattggacaagcccaaacaggaacgggaaaaacggctgcatttgggattccaatg
atcgaaaaaatcgataaagatataaagaaaatccaaggacttgtcatcgcaccgacacgt
gaattagcaatacaagttggggaagaaattcatcgtttaggacaatttaaagggattcgt
acactaccagtttacggtggtcagcacatggaccgtcaaattagagcgttaaaagaaggg
ccacaaatcgtcgttgccacccctggtcgacttttagaccatattcgcagaaaaacgatt
aatattagcaatgttcatacggcagttctggatgaagcggacgaaatgctgaacatgggg
ttcattgatgatattcgtgacatcttaaaagcaattccagaggagcgccaaacgttactt
ttctctgcaacaatgccgaaggaaattcgtgatattggtgccaagttaatgaaaaaaccg
gaagaagtaaagataaaagcgaaggaaatgacggttgaaaacattgaccagcatttcatc
gaagtacatgaaaaacaaaaatttgatactctaacaaatcttttagatatccatgcacct
acattagcgattatttttggtcgtacgaaaaaacgtgtagatgaagtgacagaagggtta
catgcgcgtgggttcagagcagaaggtattcatggagatctaacccaagggaaaaggatg
tctgttcttaataaatttaagaatggtcgaattgaaatccttgttgcaacagatgtagcg
gctcgaggactagatatttctggtgtaacgcacgtgtataattttgatattccgcaggat
ccggaaagctatgtacaccgcattggtcgtactggtagagctggaagaggtggagaagcg
gtatcttttattacaccgagagaattgccgcacttgaatttaatcgagaaggtaacaaaa
ggaaaaattaaacgtatgcaagctccatccatggatgaggctcgtcgtggacagcaacaa
gtaacgattgataaattaacgtccacaattgaaaagcaagagctagatgcatacagagag
tctgcaacagagattctaaatcaatatgattcggtaacggtcgtggcagcagcacttaag
atgttgacaaaaggcggtcgccgaaacgcacctgtaacgcttagctctgtagcaccagta
agtgttaagccagcatataaagacaaaaacaaaaagaaattccgcggggataataagcga
aactttaaccgtaaaggtggcaaaccgcaaaggaatcgaaaattccagaataaacgtggc
aaatcaaacaacttccagtctaaataa
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