Radiobacillus deserti: FN924_04245
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Entry
FN924_04245 CDS
T06091
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aqt
Radiobacillus deserti
Pathway
aqt03420
Nucleotide excision repair
aqt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FN924_04245
03430 Mismatch repair
FN924_04245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqt03400
]
FN924_04245
Enzymes [BR:
aqt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FN924_04245
DNA repair and recombination proteins [BR:
aqt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FN924_04245
MMR (mismatch excision repair)
Other MMR factors
FN924_04245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
SBDS_domain_II
Phage_T4_Ndd
Motif
Other DBs
NCBI-ProteinID:
QDP39455
UniProt:
A0A516KDH4
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All DBs
Position
778786..780186
Genome browser
AA seq
466 aa
AA seq
DB search
MGESITIMSDDRLEDIESPFKVIAGPGAGKTHWLVEHIKNVFHNSTKLSNISKISCITYT
TVGAEEVQHRLKNNLDKVDVSTIHSFLYSNIVKPYVHLLKGESGRRLVNIDEMDGHSENV
ATKGKIYKWQTEVSNGYIRDQKKIKKCLENIDWVLDNGSFILKPRKEYLRRVGTYYIKLE
DLLTYKQIFWDEGTIHHEDVLYFSYRILNEFPLILDHLSAKYPYMFIDEFQDTNPIQSEI
IKWLGNAGTIIGVIGDPAQSIYSFQGASRSDFVNFCLPNLKEYQIENNRRSGQAIVGILN
HLRQGDSLAQRSTHNQSNNPIYYFECADEITKTLLDFHNLRQELGLENDYCILTRNNGSV
KKLRNIEVTNVWTSLNEADSDRERLLKSLFTAYMLVEDGRNELAVKEVIRSLRTDKNNIL
KSPFRGTQFINPLSKRSLAVDMLEFLMNEIKQSVDFTLLSILSNTL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatcaataaccattatgtcagacgatagattagaagatattgaaagccctttt
aaggtaattgctgggcctggtgcgggtaaaacacattggcttgttgagcatattaaaaat
gtatttcataattcaactaaactttcaaatatctcaaagatttcctgtatcacttatact
acagtgggtgctgaagaagttcaacatagattaaaaaataatctggacaaggttgatgta
tctacaattcatagttttttatactcaaatatcgttaaaccatatgtccatcttttaaaa
ggtgaatcaggaagaaggttggtcaatatcgatgaaatggatggacacagtgaaaatgta
gctacaaaaggaaagatatataaatggcaaacggaggttagtaatggctatattagagac
caaaaaaagataaaaaagtgtttggaaaatattgattgggttcttgataatggttctttt
atattaaaaccaagaaaggaatatttgagaagagtaggaacatattacataaaattagag
gatttacttacctacaaacaaattttttgggatgaagggacaatccatcacgaagatgtt
ctgtatttttcatataggatattgaatgagtttcctcttattctcgaccatcttagtgct
aagtatccatacatgtttatagatgaatttcaggatactaaccccattcagtctgaaata
attaaatggttgggaaatgctggaacaataataggcgttattggcgatccagctcaatca
atatatagtttccagggtgcttcaagatccgatttcgtaaatttttgtttgcctaatctc
aaagaataccagattgagaataataggagaagtgggcaggcgattgttggaattttaaat
catttaaggcaaggtgactcattagcccaacgttcaactcataatcaaagtaataatcct
atctattattttgagtgtgcggatgaaattactaaaacgcttttggatttccataatcta
agacaggagttaggactggaaaatgattattgtattttgactcgtaataatggatctgta
aagaaacttcggaatattgaagttactaatgtttggacaagtttaaacgaggctgactcg
gatagggaaagattattaaaatcactttttactgcttatatgttagtggaagatggtaga
aatgaacttgcagtaaaagaagtgatacgttctctaaggacagataaaaacaatatatta
aaatctccattccgaggaacccaatttattaatccattgtcgaaaagaagtcttgcggtt
gatatgcttgaattcttaatgaatgaaattaaacaatcagttgacttcacattgttaagt
attctatcaaatactttatga
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