Radiobacillus deserti: FN924_05940
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Entry
FN924_05940 CDS
T06091
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aqt
Radiobacillus deserti
Brite
KEGG Orthology (KO) [BR:
aqt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqt03400
]
FN924_05940 (addB)
Enzymes [BR:
aqt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FN924_05940 (addB)
DNA repair and recombination proteins [BR:
aqt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FN924_05940 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
RRP12_HEAT
Motif
Other DBs
NCBI-ProteinID:
QDP39753
UniProt:
A0A516KEB5
LinkDB
All DBs
Position
1120585..1124076
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AA seq
1163 aa
AA seq
DB search
MGIRFMIGKAGAGKSSEVLREIEEKLKQNPQGAPILYIVPDQMTFQQEYALLKKEGLTGS
IRAQVFSFSRLAWRVLQETGGGTRKHISSTGLQMLLRKITEERTSDWSMFQKAIEKQGFI
QQLETMLAEFKRYRITPDLLRQQMATMDQYKHPYPGELALRNKLDDLTYIFDHMTEALAG
HYMDSEDQLQLLAEKIGEADFLVGSEIYLDGFHRFTPQELLVVEALLKRAEQVTVTLTMD
HPAQTEPVSELDLFCQTKETYQTVASLARELGMEVESPILLEPIDGRFQDRPYFAHLEKY
FDVRPAPAYQEAAPIQIFQAVHPRAEVEGVAQEILRLVRENGYRYKDMAVFIRQTEVYHD
LIDTVFEDYGIPVFIDEKRTMLNHPLIELIRSGLDVVEGNWRYDAVFRLLKTGFIPITDT
EYPLTPDAIDELENYVLEYGIRGRSRWLEDKPWIFQRFRGFDQASQTDKERQMQEKINHY
RDQVKTALKDFDTNLRSAKTVVERAEAIYTWLEEMEVPQQLETIRNQYDEEGENESGREQ
EQVWDGVIQLLDEMVDIIGEQSLSLSVFRTVLETGLESLKFSHVPPSMDHVVIGSIDRSR
MMGVKCAFLLGVNEGVWPMKPPSDGMITEEERELLAEHGMKLADGTKRQLLDDWFYVYLA
FTAARDRLWVSYPLSDEEGKSKVPSQLIRRIEALFPNVQHALLQDADEEKDAKRFITTPI
KTRAALTAQLAKSLRGYPVDQLWYHVLNWYVEREDKASTTYTILQSLYYQNVPMNLSKKT
TEQLYPKKVLASVSRLEMFYRCSYQHFAQYSLGLQERKTYKLDAPDIGQLFHEALKQITE
WIQQEGKEFADMRKEDAARYAGKAIQHLGPILQHQILHSSNRYQYIQQKLQEVIARAAFV
LGEQARQSKFSPVGLELGFGPNQQLPPITLDLPNGYEIQLRGRIDRVDKGVLEDQLFLRI
IDYKSSAKGLNLTEVYYGLALQMLAYLDVVLEHSETWLGVKASPAGVLYFHVHNPMISDN
KKPSDLDIEEALFKKFKMQGLLLEDKQIAQMMDIHMDGGISKIVPAGLKKTGEFRKGSHT
AEKETFQQLQGHIRALMTDAGLSMTNGTVDLNPFQQKQQTACTYCSFRSVCQFDPTLKEN
NYRRLQDMKDEDVLEAIRRKDDQ
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttgggaatccgatttatgataggaaaagcaggagcggggaagagtagcgaagttctccgt
gaaatagaagaaaaattaaaacagaacccacaaggggctccaattctatatattgtgcct
gaccaaatgacctttcagcaagagtatgccctactcaaaaaagaaggattaaccggtagt
attcgtgcacaagtatttagcttctcgagattagcatggagagtccttcaagaaacaggt
ggggggacgaggaagcatattagttcgacagggcttcaaatgctcctaagaaaaattaca
gaagaacgaacgagcgactggagcatgtttcaaaaagcgattgaaaaacaaggctttatt
cagcagttggaaacgatgcttgcggaatttaaacgatatcgaattacgccagatcttctt
cgacagcaaatggcaacgatggaccagtacaagcacccgtatccaggtgaattggcgttg
cgaaataagttagatgatttaacgtatatttttgatcatatgacggaagcccttgcaggt
cactacatggatagtgaagaccagctccagctgttagcagagaaaataggcgaggcagat
tttttagtaggttccgagatttacttagatgggtttcaccgttttaccccacaggaattg
cttgttgtggaggcattattaaagcgggctgaacaggtcacggtcacgctaacgatggac
catccagcacagacagaacccgtttcagagttagatttattctgccaaacgaaggaaacc
tatcaaacggtagcatcacttgctagggagcttggcatggaagtagaatctcctattcta
ttagaaccgatagatggtaggtttcaagataggccatattttgcccacctagaaaaatat
tttgatgtacgtccagcaccagcgtatcaagaagcggcacctattcaaatttttcaagct
gttcatccacgtgcagaagtagaaggagtagcacaggaaattcttcgcttagtccgagag
aatggatatcgctataaagacatggctgtttttatccgtcaaaccgaggtgtaccatgat
ttaattgataccgtgtttgaggattatggtattccagtttttattgatgaaaaacgtacg
atgctgaaccatccgttaatagaacttattcggtctggattagatgtagtggaaggaaac
tggcgatacgatgccgtatttcgtttgttaaaaacaggctttattccaataacagataca
gaataccctctgacaccagatgcgattgatgaactagagaattatgtgcttgagtacgga
attcggggaagaagtcgttggttagaggacaagccgtggattttccaacgctttagaggt
tttgaccaagcgtcccaaacagataaagaacgacaaatgcaagagaaaatcaatcattat
agagatcaagtgaaaacggccttaaaagactttgacacgaacctccgcagtgctaaaacc
gtagtggaacgagcagaagccatatatacgtggttagaagagatggaggttccacaacag
ctagaaaccattcgcaatcagtatgacgaagaaggcgagaatgaatctggccgtgaacaa
gagcaagtgtgggacggagttatccaactgctagatgagatggtcgacatcattggggag
caatcgctgtcactatccgttttccgaacggtgttagaaacaggcttagaatcccttaaa
ttctcgcatgtaccaccgagtatggaccatgtcgtcatcggatctattgaccgttcccgg
atgatgggggttaagtgtgcattcttattaggagtgaacgaaggcgtatggccaatgaag
ccgccaagcgatggcatgattacggaggaagagcgtgaactgttagcagagcatggaatg
aagctagcagatggtacaaaacgccaattgttagatgattggttttacgtatatcttgct
ttcactgcagcacgagatcgtctttgggttagttatccattaagtgatgaagaagggaaa
tcgaaggtaccttctcaattaatccgacggatagaagccctatttccgaatgtacaacat
gctttattacaagatgcagacgaagaaaaggatgccaagcgttttattacaacaccgatt
aaaacaagagctgcgcttaccgcacagttagcaaaaagcttaagagggtatccagtagat
cagctttggtatcatgtattgaattggtacgtggaacgagaagacaaagcaagtacgacg
tacaccatcttgcaaagtctttattatcaaaacgtgccgatgaacttatctaaaaaaaca
acagagcagctttatcctaagaaggtgcttgcgagtgtttctcgtttagaaatgttttat
cgatgctcctatcagcattttgctcaatatagtttagggttgcaggaacgaaaaacgtat
aagctagatgctccggatataggtcagcttttccacgaagcattaaagcaaattacagaa
tggattcagcaagaggggaaagagtttgcggatatgcggaaagaggatgcggcacgatat
gcgggaaaagcaatccagcatttaggcccgattctgcagcaccaaatattacacagctca
aatcgttaccaatatattcaacaaaagctacaggaagtcattgcacgtgctgcttttgta
ctaggagagcaagctcgtcaaagcaagttttcacctgtaggtttagagcttggatttggt
ccgaatcaacagcttccaccaatcacattggaccttccgaatggctatgaaatccaatta
cggggccgaattgacagggtagacaaaggtgtattggaggatcaattattcttacgaatt
attgattataaatctagtgcgaaaggcttgaatttaacggaagtgtattatggattagca
cttcaaatgctggcgtatttagatgttgtgctcgagcattctgaaacatggcttggtgtt
aaagcttctccggccggagtattgtacttccatgtgcataatccgatgatttcagataat
aaaaagccgtctgatttagatattgaagaggctttatttaagaaatttaaaatgcaaggc
ttgctattagaggataagcaaatagcccaaatgatggatattcatatggatggtggaata
agtaagatcgtccctgcaggactgaaaaagacgggagagttccgcaagggctctcatacg
gcagaaaaagagacgttccagcaattacaaggacacatccgagcgttaatgacggacgct
ggcttaagtatgacaaatggaacagtagatttaaacccatttcagcagaagcaacagacc
gcttgcacgtactgttccttccgttccgtatgtcagtttgatccgacactgaaagaaaac
aattatcgtagattacaagatatgaaagacgaagatgtattagaagcaattcgaagaaag
gacgatcagtaa
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integrated database retrieval system
