KEGG   Radiobacillus deserti: FN924_07560
Entry
FN924_07560       CDS       T06091                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
aqt  Radiobacillus deserti
Pathway
aqt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aqt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FN924_07560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqt03019]
    FN924_07560
Messenger RNA biogenesis [BR:aqt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FN924_07560
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF4453
Other DBs
NCBI-ProteinID: QDP40036
UniProt: A0A516KFC6
LinkDB
Position
complement(1429931..1431598)
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL
VQNQDKIKGLFVTHGHEDHIGGIPYLLRQLNIPIYAGKLAIGLIKNKLDEHGLLRNATLN
IVQEDDIIKFRKTSVAFFRTTHSIPDSYGIVVKTPPGNVVHTGDFKFDFTPVGEPANITK
MAEIGKEGVLCLLSDSTNSEVPGFTMSERVVGESINDIFSRVTGRLIFATFASNIYRLQQ
VVESAVRHNRKVAVFGRSMEAAITLGQELGYIQAPKDTFIDAQQINRLPAHEVTILCTGS
QGEPMAALSRIANGTHRQIQMIPGDTVVFSSSPIPGNTVSVSKTINMLYRAGADVIHGKL
NDIHTSGHGSQEEQKLMLRLIKPKYFMPIHGEYRMLKEHTKLAEACDIDPSHSFVMDNGD
VLALGKDSAMIAGKIPSGSVYVDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKEFKI
ASGPDIISRGFVYMRESEDLINEAQKIVSSHLHKVMERKTTQWSEIKNEITDTIAPFLFE
RTKRKPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaagtttgtaaaaaatgatcaaacagcggtatttgcactaggaggactaggcgaaatc
gggaaaaatacgtacggtgttcaattccaagatgaaatcatcttgattgatgctggtatt
aaattcccagaggacgaattgcttggtatcgattatgtcattccggactactcctacctc
gtgcaaaaccaagacaaaattaaagggctatttgttacacacggacacgaagatcatatc
gggggaatcccatatcttctccgtcaactaaatatccctatatatgctggaaaacttgcg
attggattaattaaaaacaaattagacgagcacggtcttttacggaatgcgaccttaaac
attgtgcaagaggacgacatcattaagttccgtaaaacatcagttgcattttttagaaca
acacatagcatacctgactcctacggaattgttgtaaagacacctcctgggaatgttgtc
cacacaggtgatttcaaatttgatttcactccagtaggagaacctgccaacattacaaag
atggcggaaataggaaaagaaggcgttctttgtttattatcagatagtacgaatagtgag
gtacctggtttcaccatgtcagaacgagtggttggtgaaagcattaatgacattttctca
agagtcactggccgattaatctttgctacctttgcatcaaacatctacagacttcaacaa
gtcgtagaatcagcggttcgccacaatcgtaaagtggctgtctttggacgtagtatggaa
gctgctattacgttaggtcaagaattagggtatattcaagctcctaaagatacgtttatt
gatgcacagcagattaatcgtttaccggcacacgaagttacgatcttgtgtacaggttct
caaggggaaccaatggcagctctatcacgtattgcaaatggtacacaccgtcagattcaa
atgattcctggcgacacagtcgtattctcatcctctccaatccctggcaacacggttagc
gttagtaagactattaacatgctttatcgagcaggtgctgacgtaattcacggaaaactt
aatgacatccacacctctggacatggtagtcaagaagaacaaaaactaatgcttcgattg
attaaaccgaaatactttatgccaatccacggggaatatagaatgcttaaagagcatacg
aagttggcagaagcttgtgacattgatcctagtcattcctttgtaatggataacggtgat
gtgttagctcttggcaaagacagtgcaatgattgcaggaaagattccgtcaggatccgtt
tatgtggatggaagtggaattggtgatattggaaatattgtgctacgtgaccgtcgtatt
ctttcagaagaaggacttgtcattgtagtggtaagtattaatatgaaagaatttaaaatt
gcatcaggtcctgatatcatttcaagaggatttgtgtacatgcgagagtctgaagactta
atcaatgaggcacaaaagattgtttcttctcaccttcataaagtcatggaaagaaaaaca
acacaatggtctgaaattaaaaatgaaattacagatacaattgcaccattcttatttgaa
agaacaaaacgaaaaccaatgattttacctataatcatggaagtataa

DBGET integrated database retrieval system