Radiobacillus deserti: FN924_08280
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Entry
FN924_08280 CDS
T06091
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aqt
Radiobacillus deserti
Brite
KEGG Orthology (KO) [BR:
aqt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqt03032
]
FN924_08280 (topA)
03400 DNA repair and recombination proteins [BR:
aqt03400
]
FN924_08280 (topA)
Enzymes [BR:
aqt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FN924_08280 (topA)
DNA replication proteins [BR:
aqt03032
]
Prokaryotic type
DNA Topoisomerases
FN924_08280 (topA)
DNA repair and recombination proteins [BR:
aqt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FN924_08280 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
HypA
SAS4
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
QDP40165
UniProt:
A0A516KFI7
LinkDB
All DBs
Position
1565472..1567550
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASMGHIRDLPKSQMGVDVEKEYEPKYITIRGK
GPVLKELKSAAKKVKKVYLAADPDREGEAIAWHLAHSLDIDETSDCRVVFNEITKDAIKE
SFKHPRPIDMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKMIIEREE
EIKKFVPEEYWSIESTFQKGKETFEGSFYGVDGKKQDLGNREAVDNILNQLKGNDFKVDK
VNKRERKRNAAPPFTTSSLQQEAARKLNFRARKTMMVAQQLYEGIDLGKKDGGITGLITY
MRTDSTRISDSAKKEAAAYIKEAFGDDYLGAVRKDKNSEGAQDAHEAIRPTSAFRDPKSL
KSILSRDQYRLYKLIWDRFTASQMAPAVMDTMTIHLLNEGVEFRATGSKIKFKGFMKVYI
EGNDDNDQEEDKFLPEIAEGETVNAKDIEPNQHFTQPPPRYTEARLVKTMEEQGIGRPST
YAPTLDTIQRRGYVTLDNRRFVPTELGEIVIDILREFFPEIIDVDFTVKMEGDLDSIEEG
QTEWIRIIDQFYNGFDKRLEKAEKEMEKIEIKDEPAGIDCEECGHEMVYKMGRYGKFLAC
SNFPDCRNTKPILKEIGVKCPNCKDGNIVERKTKKRRTFYGCDNYPECEFISWDKPISRP
CPKCDSLLVEKKAKKGTQIQCTECDYKEEPQV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatctagttatcgttgagtctccagcaaaagcaaagacaattgaacgatat
ttaggaaagaaatataaggtaaaagcatctatggggcatattagagacttacctaaaagt
caaatgggtgtagatgtagagaaagagtatgaaccgaaatacattacgatacgagggaag
ggacctgtccttaaagagctaaaaagtgccgcgaagaaagtgaagaaagtgtatctcgcg
gccgaccccgaccgtgaaggggaagcgattgcatggcatttagcgcattctttggatatt
gacgaaacgtctgattgtcgtgttgtatttaatgaaattacgaaagatgcaattaaagaa
tcattcaagcatcctcgaccaatcgatatggatttagttgatgctcaacaagctagacgt
attctagatcgtttagttggatataacatcagtcctttattatggaagaaagtgaaaaag
ggactgagcgcaggacgagttcaatcggttgctgtgaaaatgatcattgaacgagaagaa
gaaatcaaaaaattcgttccagaagaatattggtcgatagaatccaccttccaaaaagga
aaagaaacctttgaaggatccttttatggggttgacggaaagaaacaagacctaggaaat
agggaagcagtggacaacatattaaatcaacttaaaggaaatgacttcaaagttgacaaa
gtaaataagagagaaagaaaacggaatgctgcaccaccgtttactacatcttcgttacag
caagaggcagctcgtaagcttaatttccgagctcgaaaaacgatgatggttgcgcaacag
ctttatgaggggattgacctaggaaaaaaagacggtggcattactggacttatcacttat
atgcgtacagattcaactcggatttctgattctgcaaagaaagaagctgctgcatatatt
aaggaagcatttggcgatgattacttaggcgctgtaagaaaagataagaactcggaagga
gctcaggacgcgcacgaagcaattcgcccaacttcagcatttcgtgatccgaagtcctta
aaaagcattttgtcccgtgatcaataccgtttgtataagttaatctgggatcgttttaca
gcaagtcaaatggcaccagcagttatggatacgatgacgattcatttgttaaatgaaggt
gttgaatttcgtgctacgggttctaaaataaaatttaaaggtttcatgaaggtatatatt
gaaggaaacgatgataacgatcaagaagaagacaagtttttaccggaaattgccgaggga
gaaacggttaacgcaaaggatattgaaccaaaccagcactttacacagccaccaccgcga
tatacagaagcacgtttggtaaaaacaatggaggaacaaggaattggacgtccttctact
tatgctcctactttggacacgattcaacgtcgaggctatgtcacgttggataatcgacgg
ttcgttccaacagaacttggtgaaattgtaatcgatatattaagagaattttttcctgaa
attatagatgtagatttcaccgtaaagatggaaggagatttagactccatcgaagaaggt
cagacagaatggattcgcatcattgaccagttttataatggttttgataagcgattggaa
aaagcagaaaaagaaatggaaaaaatcgaaatcaaagatgaacctgctggaattgattgc
gaggaatgtggtcatgaaatggtctataagatggggagatatggaaagtttttagcttgt
tctaatttcccggattgtcgcaatacgaaaccaattttaaaagaaatcggtgttaaatgt
ccaaactgtaaagatggaaacattgtagagagaaaaacgaaaaaacgtcgtactttttat
ggatgtgacaactatccagaatgtgagttcatttcatgggataaaccgatttcaagacca
tgtccaaagtgtgattcattattagtcgagaaaaaagcgaaaaaaggtacacaaatacag
tgtactgaatgtgactataaagaagagccacaagtctaa
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