Radiobacillus deserti: FN924_11270
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Entry
FN924_11270 CDS
T06091
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aqt
Radiobacillus deserti
Pathway
aqt03410
Base excision repair
aqt03430
Mismatch repair
aqt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FN924_11270 (recJ)
03430 Mismatch repair
FN924_11270 (recJ)
03440 Homologous recombination
FN924_11270 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqt03400
]
FN924_11270 (recJ)
DNA repair and recombination proteins [BR:
aqt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FN924_11270 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FN924_11270 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FN924_11270 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Hpt
Motif
Other DBs
NCBI-ProteinID:
QDP40714
UniProt:
A0A516KH50
LinkDB
All DBs
Position
complement(2117530..2119872)
Genome browser
AA seq
780 aa
AA seq
DB search
MLQSQANWKFTYNEHQVGFEHNLNISPWTEQLLSQRGVNTEEEAEAFLHPQLTHLHNPGL
LHDIDIAVKRVKQAIHSGEKILVFGDYDADGVSSTSVMIEALKELGATCDFYIPNRFTEG
YGPNEAAFVKAKDEGYTLIITVDTGIAAVYEAEVAKNLGIDLIITDHHEVQETLPDAFAI
VHPKCSDNYPFHELAGVGVAFKFAEHLLGYFPKQLLDLVVIGTIADLVPLVDENRVLAYY
GLQAISHSKRPGLLALKELCKIERDVNEEDIGFLIGPRINAVGRLQDAAMAVDLLLTNDI
EEARELAAFIQELNEERQKIVSDIAKEAQAMVEQETPEANSHVIIVAKEGWNEGVLGIVA
SKLVRLYDRPAIVLSINPTTGKAKGSARSVDAFDLFKNCMAVRDLFTHFGGHAQAAGMTL
DVEQVAPLREALNRMAAEQLSDEDFKQVLRIEASLPIESIQIEFIKEIALLAPFGMGNPK
PLFHVQTKPREVKQIGSTSNHLKVTFEQDSYLLDGVGFGMGALFPRISPQSMLEAVGELS
INEWNGNVKPQLMMKDIAVNEWQLFDYRGSNFWYKQFTSDLENKLAVSFTDNQNMVKLPE
GFDHFTFSELPLSLLEQQTYRHIVLLDLPNRIEDLQAVLGKLNPESIYACYRNDGDRSIS
ILPTREEFKWLYAFLLKRKELKDSEVPKLASFKGWKVEKVQFMIQVFLELQFMNRDQNRI
IPSERPLKKDLSEAPSYQDMEAKLEIESVLYYSSYTELREWLKAQFNTMDPIKEEVTNGL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaagccaagcaaactggaaatttacatataatgagcatcaggtaggatttgag
cataacctcaatatttctccttggacagagcaattacttagtcaaagaggcgtaaataca
gaagaggaagcagaggcgtttttacatccacaattaactcacttgcacaatccaggactc
ttacatgatattgacattgctgtcaaacgggttaaacaggcaattcatagtggggaaaag
atattagtatttggtgattacgatgcagacggagtaagttctacttcggtcatgatagaa
gcactaaaagaattaggggcaacatgtgatttttatattcctaatcgtttcacagaaggc
tatggaccgaatgaagcagcttttgtaaaggcaaaagatgagggctatacgcttatcatt
acagtggatacggggattgcagctgtctatgaagcggaagtagcgaaaaacttaggaata
gatttaattattacagatcatcacgaggtacaagaaacgcttccagatgcttttgcgatt
gtacacccaaaatgctccgataactatcctttccatgaattagctggggtaggagttgca
tttaaatttgccgagcatttactcggatattttcctaaacagttacttgaccttgtcgtc
attggaacgattgccgatttggttcccttagtagatgagaatcgggtacttgcgtattac
ggattacaagcgattagtcattctaaacgtccagggcttctagcattaaaagagttgtgt
aagattgaacgggatgtgaatgaagaggatatcggtttcttaattggtccgagaattaac
gcagttgggcggttacaggatgccgctatggcagttgacctgcttttaacaaatgatata
gaagaagctagagagcttgcggcattcattcaggagcttaatgaagaacgacaaaaaatc
gtttcagatattgcaaaagaagcgcaagctatggtggaacaagaaactccagaggctaac
agtcatgtcatcattgtggcgaaagaaggctggaatgaaggagtgcttggtatcgtagca
tctaaactcgttcgtttgtatgatcgaccggccattgtgttatcgataaatccgaccact
ggtaaggcaaaaggatctgcaagaagtgttgatgcgtttgatttgtttaaaaactgtatg
gctgttcgtgatctcttcacccattttggtggacatgcacaagccgctgggatgacactt
gatgtagagcaagttgcgcccttacgagaagcactgaatcggatggcagcagaacaacta
tcggatgaggattttaagcaagtgctgcgtatagaagctagcttgcccattgaatcgatt
caaatagaatttataaaagaaatcgctttgctagcgcctttcggtatgggaaatccgaag
ccattgtttcatgttcaaacaaagcctagagaagtgaaacaaattgggagtacaagcaat
catctaaaagtcacatttgaacaggactcctaccttttagatggagtcggcttcgggatg
ggtgctttatttccgcgaatttctccacaatccatgctggaagcagttggggagctaagc
attaatgagtggaatggtaatgtgaagccacagcttatgatgaaagacattgctgtaaac
gaatggcaactatttgattatcgaggttccaacttctggtataaacaattcacgagtgac
ttggaaaataaacttgcggtatcttttacggataatcagaatatggtcaaacttccagaa
ggctttgatcattttacgttctcagaattacctcttagcttgttagaacaacagacgtat
cgacatattgtgttgctagatttacctaatcgaatagaagatttgcaagctgtgttaggt
aagcttaatccagagtcgatttatgcctgttataggaatgacggtgatcgtagcatttcg
attttaccaactagagaagagtttaagtggttgtatgctttcctgttaaagcgtaaagaa
ctaaaagatagtgaggttcctaaattagcatcctttaaaggttggaaagtggagaaggta
caatttatgatacaagtattcttagaattacaatttatgaatcgagatcaaaaccgtatc
attcccagtgaacgtccacttaaaaaagatttatcagaagcaccatcttatcaagatatg
gaagctaaattagaaatagagtcggtcttgtattattcttcatatactgaattaagagaa
tggctgaaagcacaatttaatacaatggatccgattaaggaggaagtaacaaatggatta
taa
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