Radiobacillus deserti: FN924_11330
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Entry
FN924_11330 CDS
T06091
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
aqt
Radiobacillus deserti
Pathway
aqt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FN924_11330 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqt03400
]
FN924_11330 (ruvB)
Enzymes [BR:
aqt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FN924_11330 (ruvB)
DNA repair and recombination proteins [BR:
aqt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FN924_11330 (ruvB)
RecFOR pathway proteins
FN924_11330 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_14
DUF815
AAA_3
RNA_helicase
AAA_22
NB-ARC
nSTAND3
Rad17
TsaE
AAA_17
AAA_18
NTPase_1
AAA_24
NPHP3_N
AAA_28
IstB_IS21
Sigma54_activ_2
Bac_DnaA
MCM
ABC_tran
Resolvase
Parvo_NS1
AAA_25
NACHT
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QDP40725
UniProt:
A0A516KH69
LinkDB
All DBs
Position
complement(2131063..2132064)
Genome browser
AA seq
333 aa
AA seq
DB search
MDDRMISGELLHDDEGIEQSLRPTSLQQYIGQHKVKENLAIFIEAAQMRNEPLDHVLLYG
PPGLGKTTLASIIANEMGVQFRTTSGPAIERAGDLAAILSSLEAGDVLFIDEIHRLPRSV
EEVLYPAMEDFCLDIVIGSGPSARSVRIDLPPFTLVGATTRAGLLTAPLRDRFGVLSRLE
YYENADLCKIVERTSEIFHVQISENAANEIARRSRGTPRIANRLLKRVRDISQVKGETEI
SLDTTTKALEMLQVDQVGLDHIDHKLLLGIMDGFQGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGFIQRTPRGRVVTPKAYEHFHREVPQA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcgtatgatatcaggggaactactgcatgatgatgaaggaatagagcaaagt
ctccgtccaacatctttacaacaatatattggacaacacaaagtaaaagaaaatttggcc
atttttatcgaggcagcccaaatgagaaatgaaccacttgatcatgttctactgtacggt
ccaccaggtttggggaagacaacgttagcgtctattatcgcaaatgagatgggagtgcaa
tttcgaacaacatcaggtccagctatcgaacgtgccggtgacctcgctgctatcctatcg
tctttagaggcaggagatgttctgtttattgatgagattcatcgactccctcgttctgtg
gaggaagttctctacccagctatggaagatttttgtctcgatattgtaattggatcagga
cctagtgctcgttctgtaagaatagatttacctccatttacacttgtaggtgcaacaaca
cgtgcaggcttactgactgcaccactgcgggatcgatttggtgttttaagcaggctagag
tactatgaaaatgccgatttgtgtaaaatagtagaaagaacctccgagatttttcatgtg
caaataagtgaaaatgctgcaaatgagattgccagacggtcacgaggaacgccccgtatc
gcgaatcgtctgttgaaaagggttcgagatatttcacaagtaaaaggagaaacagaaatc
tcgcttgacacaacgactaaagcgttagaaatgctgcaggtagatcaagtgggactggac
cacattgatcataagctattgttaggaattatggatggatttcaaggtggtcctgttgga
ttagacacaattgctgcgactataggagaagaatcccaaacgattgaagatgtatatgag
ccatatttattgcagattgggtttattcaacggacgccacgaggaagagttgtaacacct
aaagcgtatgaacattttcatcgggaggtgccacaagcttga
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