Amphimedon queenslandica (sponge): 100616089 Help Entry 100616089         CDS       T02284                                  Symbol Nfkb Name (RefSeq) nuclear factor kappa B   KO K02580   nuclear factor NF-kappa-B p105 subunit Organism aqu  Amphimedon queenslandica (sponge) Pathway aqu04620   Toll-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:aqu00001]  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100616089 (Nfkb)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:aqu03000]     100616089 (Nfkb) Transcription factors [BR:aqu03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    RHR (Rel homology region) Rel/Ankyrin     100616089 (Nfkb) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RHD_DNA_bind Ank_2 Ank RHD_dimer Ank_4 Ank_3 Ank_5 Death ArnR1-like_WHD DUF6990 Motif Other DBs NCBI-GeneID:  100616089 NCBI-ProteinID:  NP_001266238 UniProt:  A9Y5G7 LinkDB All DBs AA seq 1095 aa AA seqDB search MAFNGIDPSSLPEALIRDTMNTLPTHIVNSNPDSLNSSPYSSLTQVRLEIVEQPKSRGFR FRYDCEGQSHGGLPGENSEKNRRQKTYPTVHLKGYRGRARVMVSLVTDSDPAMPHAHSIV GKNAIDGRCVVEIGPETDMYAQFTSLGILHVTKKKVPEVLTRRLLQQTTPRGQMVDQMEV VDVDMTTAQLTSEEQDEIHQQAQTLAKSMNLSVVRLCFQAFLPDENGRYTIPIDPVFSNK VYDSKAPSAGTLKICRLDRTSGSVKGGDDVFLLCDKVQKNDIEVVFYEDKQETTGGMQLQ PWMAKGRFGPNDVHHQYAIVFQTPTFYNQAIEHPVQVWIALKRPSDHETSEPKPFLYLPQ EFDEERIGQKRRKKITHFNNFFEGPGGGGGAGGGAGGAGGNFFSRDFNYGSGGGYNSGFN FFGGSSGGGGGSGGGSANNAGTGGGTTFSGGNTSAANMPVSVDSLYSTLPPSSNQHIFAA TATNPHYPHMRQQQPHGLSFSNGGGRGMGGTMYSHAMDQQFMSTASGHLVSRTGAGGVTV KREPPDYYMDVERDNVQPPLPALSEEGGTGGGNIMRPKDQLPPSQRGPGDSGKLLDVSSN IEDVESGYVEAERMDSGLPTSMAAEPSQESTSSETEAQQALQALKDRQQMAFEVCDRMFN ALLAWATTKDIRYLLAAQRSLTAVQNQEGDTALHLAIIHNHQDVVLQLLDVLPQLPPTET PVVDCLNNFKQSPVHLAVITRQHKVVQYLLKANANPLVSDRNGDTPLHLACKYGFLQGIV PLLNRSTRINTEGCRIPELVMRNNDGLTPLHLAAACGNPDCFKELVKAHADVNVQDSKSG KSALHYLIEKGDLPLTGFLITESETNIECTDFSGNTPLHCAAALGNVAIVSLLIAAGANL VCQNQEGELPLVLAEYGGHEEVVKVLKDSLVKAGLDKPEEQLSTQMKSVSLTEEDKALAA LRANSSEGDLSKLDFRPRISLALILDPINEGCDWKALAKCLSLSHLEAGLEAMTSPTKEL LTMYEACDGTIAKLRQALLDINRSDAVNIIDRYMQEEKGIVTSKQTYDSGISSNPSSLSN EQVVGKHSTIPSSQV NT seq 3288 nt NT seq  +upstreamnt  +downstreamnt atggcttttaatggtattgatccctcttctctccccgaggcactcattagggataccatg aacactctcccgactcacattgtcaacagcaatccggactcactcaacagctcaccttat tcttctttgactcaagtccgacttgaaattgttgaacaaccgaaatcaagaggattcagg ttccgttacgactgtgagggtcagagtcacggtggtctcccgggagagaattccgagaaa aaccgacgccaaaaaacctatccaaccgtccacttgaaaggttatcgtgggcgggcccgt gtgatggtttccttggtaacagactctgacccagcaatgcctcatgcccattctatagtt ggaaagaatgctattgatggtcgctgtgttgtagagatagggccagagacggatatgtat gcacagttcacaagtcttggtatacttcatgttactaaaaagaaagtccctgaagttttg acgaggcgtctcttacagcaaacaactcctcgtggacaaatggttgaccaaatggaagtg gttgatgttgatatgaccaccgcccaactaacatctgaagagcaagatgagatacaccag caagctcagactttagccaagtcaatgaatctctctgtggtaaggttgtgctttcaagcg ttcctccctgatgagaatggacgctatacaataccaattgatcctgtatttagcaacaaa gtctatgacagcaaggcaccttctgctggtacattaaagatatgtcgtcttgatcggacc agtggcagtgttaaaggcggagatgatgttttccttctttgtgacaaagttcaaaagaat gatattgaggttgtattttatgaagataagcaggaaactactggtgggatgcagttgcag ccgtggatggctaaaggaaggtttggacccaatgatgtccatcaccagtatgcaatagta ttccaaactccaacattttacaatcaagctatagagcaccctgttcaagtatggattgct ttgaagagaccttccgatcacgagacctcagaaccaaaacctttcctctacctaccacag gaatttgatgaggagcgtattggacaaaaacgtagaaagaagatcactcactttaacaac ttctttgaaggtcccggtggagggggtggagcagggggaggggctggaggagctggcggt aattttttctcaagagatttcaactatggttctggcggtggttacaacagtggctttaat ttctttggtggcagcagtggaggagggggagggtctggtggagggtctgctaataatgcc gggactggaggcgggaccacgttctccggtgggaacacttcagctgctaatatgccagta tccgttgactctctttactcaactctacctccatcgtccaaccagcacatctttgctgcc acagccactaatcctcattacccacacatgaggcagcagcagcctcacggtctctccttt tccaacggaggagggaggggaatgggaggaactatgtactctcatgctatggaccaacag ttcatgtcaaccgctagcggacacttggtctctcgtactggagctggtggcgtcactgtc aagagagaacctcctgattattatatggacgttgaaagggacaatgttcagcctccatta cctgctctgtcagaggaaggaggaacaggtggtggtaatatcatgagaccaaaggatcag ctccctccttctcaacgtggccctggtgacagtggtaagctccttgatgttagcagtaat attgaggacgtggagtcaggctatgttgaggcagagagaatggactcaggactgccaact agcatggctgctgagccttctcaagagtcaacctccagtgagacagaggcccagcaagct cttcaagctcttaaggaccgacagcaaatggcctttgaagtctgtgacagaatgttcaat gcattattggcctgggccaccactaaagacatacggtacctcctggcggctcagaggagc ctcacagcagtacagaatcaagagggagacactgcacttcatttggctatcattcacaat catcaagatgtggtccttcagttattggatgttctcccacaactaccaccaactgagaca cctgttgttgactgtttgaacaatttcaaacagtccccagttcatttagctgtcatcaca agacagcataaagtagtccagtatcttcttaaagctaatgcgaatcctcttgtctctgac cgtaatggagacactcctcttcaccttgcctgcaagtacgggttcctccaagggatcgta cctctactgaacagatcaactcgtatcaatactgaaggctgtcgtataccagagctggtc atgaggaataatgacggcctgactcctcttcatttggctgctgcttgtggtaatcctgat tgtttcaaggagctagtgaaagcccatgctgatgtcaatgttcaggatagtaaatcaggt aaaagtgctcttcattatctcatagagaaaggtgaccttccactgacaggattcttaatc actgagtctgagactaacattgagtgcactgatttctctggtaatactccactccattgt gctgctgctcttggtaatgtggcaattgtgtctctactcattgcagcaggtgctaatctt gtctgtcagaatcaagagggagagctccctcttgtgttggctgaatatggaggacatgaa gaagtagtcaaagtgttaaaggactcactagtgaaagctggtcttgataaaccagaagag caactatcaacacaaatgaaatcagtctctctgaccgaagaggacaaagctttggcagct ttgagggcaaacagctccgagggtgacctcagcaagttggatttccgcccgaggatttcc ctggccctcatccttgatccaatcaatgaaggatgtgattggaaggctttggcaaaatgt ctctctctctctcatcttgaggccgggctcgaggcaatgacgagtcctaccaaagagcta ttgactatgtatgaggcttgcgatgggaccattgctaaactccgccaggcactcctggat atcaatcgtagtgatgctgtcaatataattgatcgatatatgcaagaagagaaaggtatt gtcactagtaaacagacttatgattctggcatcagttcaaatccttcatctctctctaat gaacaagttgtagggaagcactccaccattccttctagtcaagtttag

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