Amphimedon queenslandica (sponge): 100616090
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Entry
100616090 CDS
T02284
Name
(RefSeq) NR1 nuclear receptor
KO
K08525
retinoid X receptor beta
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aqu03000
]
100616090
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aqu03310
]
100616090
Transcription factors [BR:
aqu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100616090
Nuclear receptors [BR:
aqu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100616090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
100616090
NCBI-ProteinID:
NP_001266240
UniProt:
B1A9Z2
LinkDB
All DBs
AA seq
636 aa
AA seq
DB search
MCYKNLFLMEQQTSPIPNGTRPDPCYNELDLFDYSSTLPLSHGLELGDANTSPMSFASDC
SPPPHPDFLDTSYGGVPRYPAGHYQKRVGYTSERDPFFSXQQPGMRGGMGHLSSSRAVYN
GFANPPEYAYQQHQQHNRIPTHLPGYLQILQGFQDQYSPEDLDVKFAVPPSSLGSLTGPG
SNXGSPPSTTIHPQSACKVCNDVASGNHFGVLSCEACKSFFRRSVRAGARYACRGTRNCS
VEKHTRNRCQYCRLQKCLQTGMRKEAVQEERAPPVTRIQRAGTPTQLGYSASPAFSPTTF
PNGPPLPPVPPMPSSFRYDGPVSPIMPSNFMTQSRLSGSLPNLKMGCGTGGYGDYDCPPM
TPPIHMPPVEPYTGGSRPSTPSSINMTSGVPSSTVPPYSDSVSSMPEPTPSAVSPFVLVT
ADMQTESLPDNVTPSDQGIKLEDIFEGARQSLLRVIEWSKRIPAFTTLSLDDQVKLLKSC
WCEHVLLKQATRIGPHSDTILLSSGLTCRKDQIEDPEVRRIVERVSHEISYWFDVLHVDK
VEMACLKGIILFNPDAKGLNPGTRKRVEIFQEQILQALETRCKTMYPVTPLRFSKLLLRL
PPLRAAALESTQHMEVQRTLGNAKLDTIFGELLDFD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtgctacaagaacttatttctaatggagcagcaaacttctccgatcccgaacgggact
aggccagacccttgctacaacgagctagatttattcgactattccagtactcttccatta
tctcacggcctagagcttggagatgctaatactagccccatgagctttgcttctgattgt
agtcctccaccacaccccgacttcttagacaccagctatggcggagtccctcggtacccg
gccggacactatcagaagcgcgtcggatatacctcagagcgtgatccttttttctcctmt
cagcagccagggatgagaggaggaatggggcacctctcgagtagtagggctgtgtacaat
gggtttgctaacccgcccgagtacgcgtaccaacagcaccagcaacacaatcgtatccca
acacatttacctggttatcttcaaattttgcagggttttcaagaccagtactcaccagaa
gatctggatgtcaagttcgctgtccctccttcctctctgggctccctaacaggccctgga
agtaatgytggcagccctccttcaactaccatccatccacagtctgcctgcaaggtctgt
aatgatgtggcctctggaaatcatttcggagtcctctcatgtgaggcctgcaagagtttc
ttccgaaggagtgtgagggctggggcccgctatgcctgtcgagggactaggaactgttcg
gttgagaaacacacgaggaacagatgccagtactgtcgacttcagaaatgccttcagact
ggaatgagaaaggaagctgttcaagaagagcgggctcctccagttactaggatccagcga
gcaggtacccctacacagctaggctactctgcttcgccagctttcagtccaactactttt
cccaatggtcctcctctcccacctgttccgcccatgccttcatcattccgctacgatggg
ccagtcagtcccataatgccctctaacttcatgactcagagtcgtctatccggctcacta
cctaacctcaagatgggatgtggtactggaggatatggagattacgactgtccccctatg
actccccctatacatatgcctcctgttgagccttatacaggagggagtcgcccctctact
ccatcaagcatcaacatgacgtcaggagttccatcatctacagtcccgccttattcagac
tctgtgtcttcaatgccagagccaactccaagtgcagtaagcccttttgtactcgtaaca
gcagacatgcagactgaatctctgccagacaacgtcactccaagtgatcaaggyatcaag
ctggaggacatatttgagggagcacgccagtctctcctacgtgtgattgaatggagcaag
cggataccagctttcaccacactctctcttgatgatcaagtcaagctccttaaatcctgc
tggtgtgaacatgtcctcctcaagcaagccactcgcattggtcctcactctgatactatc
ctactcagctccggtttaacctgtcgcaaagaccagattgaggatcccgaggttcgtagg
attgttgagcgggtttctcacgagatctcgtactggtttgatgtccttcatgttgataaa
gttgagatggcctgtcttaagggaatcatactctttaatcctgatgctaaaggccttaat
ccaggtacaagaaagagggtagagatatttcaggagcaaatactccaggcattggagacc
aggtgcaaaaccatgtaccctgtgactccacttcgtttctctaaacttctcctccgtctc
ccacctctgagggcagcagctcttgagtccacacagcacatggaagtccagaggactctg
gggaatgctaaactggacacaatctttggggagctccttgactttgattaa
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