Amphimedon queenslandica (sponge): 100631829
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Entry
100631829 CDS
T02284
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100631829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100631829
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100631829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
100631829
NCBI-ProteinID:
XP_019855210
UniProt:
A0AAN0JDW7
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MKRKERVPPKQTLFTYFKPIQTPPYKEKGSRDDRKDQENEEPKIKMEFETTPTRIKQQPV
ETDSDEDDMIGRTKTLSGRIKRKSSMSVEERSKVNKRKRSSRFLESDEEEDNSSLIEEAW
PEADDVTPMKQPKAQFLTPRSCSSTPKVLLTTPTNNSLPVTPSGGVSVGCGLDKIGTFLH
DTLDFIKDANRRDKNKVLFGDPNHNPRTLLVPQLFLNKLTPAMRQWWNIKSDNYDTILFF
KVGKFYELYHMDAEVAVKELKIVFMKGDFAHAGFPEKAFGKYSQTLIQRGYRIARVEQTE
TPQMMENRIKKMASTPMKFDRVVSRELCSLVSKGSRTIGFFEGEEPETDSAYLLSIKENI
GSCSGTQFGVCFIDTCIGTFHVGQFEDDRQLSRLRTLLAHYHPVEVILERGNLSYRTSQL
VSQVLSTALKDTLSPGSEFWDATRTLKYLIEEGYFEQNTVHPDLQKMISDEDSLGMSPSP
GYELALSSFGACLWTLKRSLIDKEILQLNQFQEFVPVDQLLVFDESLVSGEGVSPDSASF
NVSMTTCTQSPNQKMVLDGITLYNLDVIDNSGSGIGTLLQRIDNASTSFGRRLLKVWLTA
PLCNPAGIRERQEAVTELVNKPHLLPEIREILKSLPDLERLLRRIVVLGSKVRSESHPDS
RAILYETITYNKKKIKDFLSLLEGLDKTTQIVELFSSQSLASKLLINLVTLQTEQGQFPD
IKDQLQYFKAAFDHKIAKERGSIIPLPGVNEEYDQSLEEIRQVEEELEQYLLKQRKRLNC
KNISYFGTGRNRYQLEVPATVQVPDDYEIKSQRKGFLRYVTPETEELKARLTTGEETKET
VLQGTVRDLFHSFGEYFSLWDGAINCVSVLDVLVSMATYSSGEEVMCVPQVTASEFPYLD
IKDGRHPCVIQTFTGGEFIPNDIVINPDRAAGGKMCTLVTGPNMGGKSTLMRQTGLIVIL
AQMGSYVPASSCSLSPVDRIFTRLGASDRIMYGESTFYVEVSETNLILQHSTPHSLVLLD
ELGRGTATYDGSAIATSVVKYISERKGCRTLFSTHYHGLVDLFKDSPHVQLGHMSCMVGE
EGEESITFLYKFVPGACPKSYGFNAAKLAGLPQEIIDVAKETARNFERSTLKTQLIRELL
SVGSVPPVTVRSQYKAMIKDILYN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaagaaagagttcctccaaagcaaaccttgttcacttacttcaaaccaata
cagacacctccttataaggagaagggatcacgtgatgataggaaagatcaggaaaatgag
gaaccaaagatcaagatggagtttgaaaccacacccaccagaatcaaacaacaaccggtg
gagaccgacagtgatgaagatgacatgattgggaggacaaaaactttgtctggtcgtatt
aaacgtaagtcctccatgagtgttgaagaacgtagtaaagtaaataaaaggaagaggagc
agtcggttccttgaatcagacgaagaagaagataatagctccttaatagaggaggcatgg
ccagaagctgatgacgtcactccaatgaaacagccaaaggctcagtttttgactcctaga
agctgttcatcaactcctaaagtactcctaaccacacccactaacaatagtctgccggtc
acaccctctggaggtgtgtctgttgggtgtggtcttgataaaattggtacttttcttcat
gacactcttgacttcattaaggacgctaatagacgtgacaagaataaggtcctgtttggt
gacccgaaccataatcctcgtactctactggtgccgcaattgtttcttaataaactgaca
cctgcaatgagacaatggtggaatattaaatccgataattatgacaccattttatttttt
aaggttggtaagttttatgagttataccacatggatgctgaggttgctgtgaaggagctg
aagatagtcttcatgaaaggtgatttcgctcatgctgggtttccagagaaagcttttggg
aagtactcccagaccttaatacagagaggatatcggattgctagagtggaacagacagaa
actcctcaaatgatggagaacagaataaagaaaatggccagtacccccatgaagtttgat
cgggtggtctctcgtgaattatgttcactagtcagtaaaggttccagaaccattggattc
tttgagggagaagaaccagaaactgattcagcttacctcctatcaataaaggaaaatatt
ggttcctgttctgggactcagtttggagtctgctttatcgacacatgtattggaacattt
catgtaggtcagtttgaagatgatcgtcagctctcaaggttaagaacactcctggctcat
tatcaccctgttgaggttatactggagaggggtaacctgtcatacaggactagtcaactg
gtcagtcaggttctgtccactgctcttaaggacaccctatcaccaggttctgagttttgg
gacgccactaggacactgaaatatcttattgaagaaggatactttgaacaaaacacagta
catcctgacctccagaaaatgatatctgatgaggacagtttgggaatgagtccttcccct
ggctatgaactggccctcagttcctttggtgcttgtctttggacattgaagaggtctttg
attgataaggagatactccaactgaaccagttccaagagtttgtaccggtcgaccagctg
ttggtttttgatgaatcattagtgtctggggagggtgtgtcccctgactccgcctctttt
aacgtttccatgacaacttgtactcaatctccaaatcaaaaaatggttctggatggtatc
acgttatataacttggatgttattgataactctggctctggtattggtaccttactccag
aggattgataatgccagtacttcttttgggcggagactattaaaggtctggttgacagct
ccactgtgtaacccagctggtattagagagagacaagaagcagtcactgaactagttaat
aaaccacacttactaccagagataagagagattctcaagtcattacctgatttagagcga
ctgttaagaaggattgtggtgctggggtcaaaggtcaggtctgagtcccatcctgacagt
agagccattctttatgaaaccatcacttataataaaaagaagattaaagatttcctgtcc
ttgcttgagggtttggataaaactactcaaattgttgagttattctcttctcaatcgctg
gcatcaaaactactcatcaacctagtcacactacaaactgaacaaggtcagtttcctgat
attaaggatcaactccaatatttcaaagctgcgtttgatcataaaatagctaaggagaga
ggatccattatccctttacctggtgttaatgaggagtatgaccagtcactggaagagata
aggcaggttgaggaggagctagagcaatacttactgaagcaaaggaagagactcaactgt
aaaaatatcagttattttggtaccggacggaataggtaccagttagaggtccctgctaca
gtacaggttcctgacgattatgagataaagagccagcggaaaggattcctgaggtacgtc
actccagaaaccgaagaactaaaggccagactaaccactggagaggagaccaaagagact
gtactgcaaggaacagttagagacctgtttcactcgtttggagaatatttttctctttgg
gacggtgccattaattgtgtatctgtacttgatgtccttgtttccatggcaacctacagt
tcaggggaggaggttatgtgtgttcctcaagtgacggctagcgagtttccttatttggat
attaaagatggccgccatccttgtgtgatccagaccttcactggaggagaatttatacca
aatgacatcgttattaatccagatagggcagcaggaggtaaaatgtgtacactagtcacc
ggacccaacatggggggaaaatcaaccctaatgagacaaactggacttatcgtcatactg
gcacaaatgggttcctatgtccctgccagcagttgttctttgtctccagttgacagaata
ttcacgagattaggagcctcagacagaataatgtacggagagagtaccttttatgttgaa
gtgagtgagactaacctcattctccagcactctacccctcactcactggtactccttgat
gagctaggtcgtgggactgctacatatgacgggtcggccattgctacttcagttgtgaag
tatatctcagagaggaaaggatgtaggaccttgttctccactcattatcacggactggtt
gacctctttaaagacagtcctcacgtacaactaggacacatgtcgtgcatggtcggagag
gaaggggaggagtctattacatttttatacaagtttgtccctggggcctgtcctaagagc
tacgggtttaatgcagcaaaactagcaggactaccacaagaaatcattgatgttgccaag
gaaactgctcgtaattttgagagatcaactctgaagacacaattaattagggaactgtta
tctgttggttcagttcctccagtgactgtccgttcacaatacaaagcaatgatcaaagac
atactttataactaa
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