Amphimedon queenslandica (sponge): 100631908
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Entry
100631908 CDS
T02284
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03013
Nucleocytoplasmic transport
aqu03015
mRNA surveillance pathway
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100631908
09122 Translation
03013 Nucleocytoplasmic transport
100631908
03015 mRNA surveillance pathway
100631908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100631908
03041 Spliceosome [BR:
aqu03041
]
100631908
03009 Ribosome biogenesis [BR:
aqu03009
]
100631908
03012 Translation factors [BR:
aqu03012
]
100631908
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100631908
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100631908
mRNA cycle factors
Stress granule specific factors
100631908
Spliceosome [BR:
aqu03041
]
Complex C
Other components
EJC/TREX
100631908
Ribosome biogenesis [BR:
aqu03009
]
Eukaryotic type
90S particles
Helicases
100631908
Translation factors [BR:
aqu03012
]
Eukaryotic type
Initiation factors
eIF-4
100631908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
100631908
NCBI-ProteinID:
XP_003386473
UniProt:
A0A1X7UYB8
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MATVDKAKAQRRALLGDEDASMVFETSKGVDVVATFDGMNLREDLLRGIYAYGFEKPSAI
QQRAIVPIIRGRDVIAQAQSGTGKTATFSIAILQKTDIQLRETQALVMSPTRELATQIQK
VILALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVAGTPGRVFDMIKRRNLRTQSIKLL
VLDEADEMLNQGFQEQIYDVYRYLPPSTQVVLASATLPVEILQMTQKFMTDPIQVLVKRD
ELTLEGIKQFFVAVEKEDWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMREANFTV
SSMHGDMPQKERETIMKEFRAGDSRVLITTDVWARGLDVQQVSLVINYDLPNSRELYIHR
IGRSGRYGRKGVAINFAKNDDIRILRDIEQYYSTQIDEMPMNINELV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtcgataaggcaaaggcacagaggagagctcttcttggagacgaagacgct
tcgatggtgtttgaaaccagcaagggagtggacgtggtggccacctttgacggaatgaac
ctcagggaagatctactgagaggaatatacgcttatgggtttgagaagccttcagctatt
cagcagagagccattgtccccatcattagaggaagggacgtcatagctcaggcccagtct
ggtactggcaagacagcgacattctccatagccatactccaaaagactgatatccagtta
cgtgaaacccaagcacttgttatgagcccaaccagagaactggccactcaaatacaaaag
gttatacttgccctgggtgattatatgaatgtccagtgtcatgcttgcattggaggcact
aatgttggagaggacataaggaagcttgactatggacagcacattgttgctggtacccct
ggaagagtgtttgatatgattaagaggagaaacctcaggacacagtccattaagttgttg
gttcttgatgaagctgatgaaatgctaaaccaaggttttcaagagcaaatatatgatgta
tatcgctaccttccgccttcaacccaagttgtgcttgctagtgctacccttcctgttgaa
atactccaaatgactcagaaattcatgaccgatcccatacaagtcttagtaaaacgtgat
gagttgactctagaaggcataaagcagttctttgttgctgttgagaaggaagactggaag
tttgacaccctctgtgacctttatgacacactcaccatcactcaagccgtcatcttttgc
aacacaaagagaaaggttgagtggttaactgagaagatgagagaagctaacttcaccgtt
tcatcaatgcacggtgacatgccacagaaggaacgagaaactataatgaaagagttcaga
gccggagacagtcgagttttaataaccacagacgtgtgggcaagaggtcttgatgttcag
caggtctctcttgtcattaattatgatcttcctaacagccgtgagctctacatccacagg
attggtcgttctggtagatatggcaggaaaggtgttgccattaactttgcaaagaatgat
gacatccgcatactgagggacattgagcagtactactccacacagattgatgagatgccc
atgaatattaatgaacttgtctaa
DBGET
integrated database retrieval system
