Amphimedon queenslandica (sponge): 100632169
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Entry
100632169 CDS
T02284
Name
(RefSeq) ATP-dependent RNA helicase DEAH12, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100632169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100632169
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100632169
Spliceosome [BR:
aqu03041
]
Complex C
Other components
Step II factors
100632169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_DEAH11
IBR
Helicase_C
IBR_1
DEAD
AAA_22
zf-RING_11
OB_NTP_bind
AAA_19
IBR_2
HA2_N
zf-RING_2
HA2_C
KH_DEAH11_2nd
ABC_tran
nSTAND3
Ploopntkinase3
ATPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
100632169
NCBI-ProteinID:
XP_003388531
UniProt:
A0A1X7UB00
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MMATTGGDIIIKVIGSAQVTSLYITLTTVEPQTEQTFKSYLQSKIRLKKGSFTIIKFKPT
NNEGTVEIEISFASINKAKRARRVISKHTPNAIVSLQSFSSATLRDSIVKYRGMMTLKTS
QYIEQHDIKIQNVQAHEKELKQESKKLSLAEAGRRLSSLEVVKEEVKELRRQKEEFLKTC
ADIDQKFVRLEASLYSRRKPLNDQMTSLQKRFARECVRLFKSLPIYARRSDIINTVTRNQ
VVVLIGETGSGKSTQIVQYLYDAGFGERGLIACTQPRKVAAITLANHVSKEMCSSVGEVV
GHRLGSFDSTSSETVIVYMTDHSLLNEIIADPWLRQYSCLVIDEAHERSLNTDILLSLIK
QCLLQRPELRIIITSATINPDIFVKYFGGSVSCPVVRVSGRTFPVEVIWNPLSIQYSADC
TPLTIDIVNNCLSVVKKIHTEEPDGDVLVFLSSLGDIETACSAATDEFPDAVVLPLHGRL
QPDEQRRVFEDVPGRRKIVFSTNVAETSVTIPGIKYIVDSGLAKEMCFDPKRNMNSLEEC
LISKSSAEQRKGRAGRVSAGKCYRIYTEDQYYNMRERTPPEILRMHLIHAVLKLYEFGIA
DILSFDFVEKPDQATLKSAVDTLQFLGAVNDGSSQDRLTKFGRQLAILPIDPQLGKVLLD
GIEAGIGLEAAVSVSLSSFGGNVFYRAGNDEAKRESDRMKIQFVHSGGDQMTCLSVYKKW
SSCKKEERNRWCVRNYINAKSMRMVEETVKELRHILCYSFQINLPHKLPPSLSLAESQLP
KLYFFAFLRNLAVYLGHSWIGYMTTAHLSSINDPLVPFPGSALVQHNETPQYVIYEKTLK
TSKHFLLQVLSVEQDWITEAISRGQLSHDPAEDAKEYIVSPVILDRIGQVIGSKCFRNDI
RGLTERMRAVCDGAPVQADLGQLNLGKICVYSSKKYHNRLKEFLSKKVQMARTELLSGCI
ESGVVRPDDVIRVVLSRGGAIEHVLMPHQYRTIVVRGPNTTAINEAVPALTESGVILNTK
LKEFKNESKLFVTFSHPLMASHAVSNVTNLPKEVTVIPQFQKASGSPSLKYFRLKVEWVR
RERKDFGFVEFSTFNDYFSCLQKIGSSVIVCGSILQIKPSHKPNQLFMPQVAKHITKEDI
EDVLDALLQDTGAEYKVFFIREKSFETSDALHLALEYQLKYVLQKYALENQFIVKFNKPS
PQHADYRAFVDFFDPSVGQRVMNNLNGESVAGKPLNVQVVLCTSVRFTPQIYSVVSEEVD
QVKANIEQEFSQVVRFVQKPDKYGNVIVEIQSTDVEAFGAAKSLLNNLLLPVVQECQSPL
LCHYILSKLSRKELDDIQCATTTVIICNTRSMTISIYGNKSNQELARCKLDDHIQYLESR
GISIHDIHLKGQGKPPGLMKHIVSTFGVDLTGLLSLEGVESATLEPRKQVLSMFCSNDAY
DHIKKVISDYSVSKPKANAADVLECSICLCEIEDASEVFLLEYCGHASHIQCIAVQVAAN
AVTFPLQCSAEGCSESFVWQDCENLFKKTSLTLAGLVESSLKSFLGANRDKARPCPTPDC
QMVYAVSNDGQRFVCPHCQIQICTTCHEQYHDGLTCEMYKSSKNVENKFQEWLKENPKNR
KQCPKCTIAIEKTEGCNYMYCIQCRTHICWVCTKPFDNEQDCYAHLHKVHGGIQ
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgatggccactacaggtggtgatataattatcaaagttattggttcagcccaggtaaca
tcactgtacataacgttgacaacagttgaacctcaaaccgaacaaacattcaagtcctac
cttcaatcaaagatacgattgaaaaaaggctccttcacgattatcaaattcaaacctacc
aataatgaggggacagtagaaatagaaataagctttgctagtatcaataaagcaaagaga
gcacgaagagttattagtaaacacactcctaatgccatcgtatctcttcaaagcttttcg
tcagctactctaagagattcaatagtaaagtacagaggcatgatgacacttaaaacctca
caatatattgagcaacatgacattaagattcaaaatgtacaggcacacgaaaaagaacta
aagcaggagtcgaagaagctaagtctagctgaggctggaaggagattgtctagtttagaa
gtcgttaaagaggaagtgaaagagcttcgtagacagaaagaagagttcttaaaaacgtgt
gccgatattgatcagaagtttgttcgattggaagcatcattatattcgagacgtaaacca
ctcaatgaccagatgacttccctacagaaaagatttgcaagagaatgtgtccgtttattc
aaatcactaccgatatacgccagacgtagtgacataatcaatactgttactaggaaccag
gttgttgttcttattggtgaaacagggtctgggaagagcacacagattgtacagtatttg
tatgatgcagggtttggggaacgtggcctcatcgcatgcactcagccaagaaaagtagca
gccattacactcgctaatcacgtctcaaaggaaatgtgttcgtctgttggtgaggtggtg
ggtcatcgtttaggctcctttgatagtaccagctctgaaactgttatagtctatatgacc
gatcatagcctccttaatgagatcatagctgacccatggctcaggcaatactcgtgttta
gtaatagatgaagcacacgagaggagtctcaatacagatatactattgtctcttatcaag
cagtgcttgctgcagcgtcccgaattaagaatcataatcacatcagccacaattaatccc
gatatatttgtcaagtattttggtggcagtgtctcttgtcctgttgttagagtttctgga
cgaacttttccagttgaagtcatatggaatccattgagtatacagtactcagccgactgc
actccactaaccattgacattgttaacaattgcctgtcagtggttaagaagatacacact
gaagagcctgatggtgatgtactggtattcctctcctctcttggtgatattgagacagct
tgttcagcagctactgatgaattccctgatgctgtagtactcccattgcatggccgtctc
caaccagatgaacaaaggagagtttttgaagatgtcccaggaagaaggaagatagtattc
tctacaaatgtggcagagacctcagtaactataccaggaataaagtatatcgttgacagc
ggtctagccaaggagatgtgctttgatccaaagcgtaatatgaattcactagaagagtgt
ctcatcagtaagagttctgctgagcagaggaaagggcgtgctggtcgtgttagtgctggt
aaatgctaccgtatatacacagaggaccagtattataatatgagagagagaacgccacca
gagatacttagaatgcaccttattcatgctgtccttaagctgtatgagtttggtattgct
gatatcctctcatttgattttgttgagaaaccagaccaggcaacactgaaatctgccgtg
gatacactccagtttcttggtgcagttaatgatggtagcagtcaagatagattaaccaag
tttgggcgtcagttagctattttaccaattgatcctcagctgggtaaagtgttactggat
ggtatagaagctggtataggcctggaggctgcagtgtctgtttcgttatctagttttgga
ggtaatgtattctatagagcagggaatgacgaagcaaagagagaaagtgatagaatgaag
atccagttcgttcattctggtggtgaccaaatgacgtgtctttctgtttacaaaaagtgg
tcatcttgtaagaaagaggaaaggaacaggtggtgtgtaaggaattacatcaatgcaaaa
agcatgaggatggtagaggagacagtcaaagagttgcgtcatattctctgttatagtttt
cagataaacctaccacataagctaccaccttcgttatcattagctgagtcacagctccca
aagctttacttcttcgcatttctacgcaaccttgctgtgtacttaggccactcttggatt
ggttacatgactaccgcacacctgtcttcaataaatgaccctttggttccttttcctggc
tctgctctagtacagcataatgagactccacagtatgtcatttatgaaaagacgctgaag
acatctaagcattttttacttcaagtcctctcggtcgaacaagattggataactgaagca
atatcacgtggccaattatctcatgatccagctgaagatgcaaaggaatacattgtctct
cctgttatattagataggataggccaagtcataggttccaagtgtttcaggaatgacatt
agaggactaactgagcgaatgagagcagtatgtgatggagcaccagtgcaagctgacttg
ggccaattgaatttggggaaaatttgtgtctattcttcaaagaaatatcataaccgcctg
aaagagtttttaagtaaaaaggttcaaatggctcgtactgaactgttaagtggatgtatt
gagagtggagttgtaagaccagatgatgttattagggtagtcctcagcagaggtggtgca
atagagcatgtgttgatgccccatcagtatcgaactattgtagttaggggacctaatact
actgctataaatgaagctgtgcctgccctaacagagagtggagtaattctcaatacaaaa
ctcaaggaatttaaaaatgaatcaaagctattcgttaccttttctcatcctttgatggca
tctcatgctgtatccaatgtcacaaatttgcctaaagaagttactgtgattcctcaattc
caaaaagcaagtgggagtcctagtttaaagtatttcaggctaaaggtagagtgggtaaga
agagagaggaaagattttggctttgttgagttttccacatttaatgactattttagttgc
cttcaaaaaattggttcttcagttattgtttgtggatcaattttacagattaagccatca
cataaacccaatcagctcttcatgcctcaagtggctaaacacatcactaaagaagatatt
gaagatgttcttgatgctcttctgcaagatacaggtgcagagtacaaagtattttttatt
cgtgagaagagttttgagactagtgatgcattacacttagctctagagtatcaattgaaa
tatgtgctacagaaatatgccttagagaaccagtttattgttaaatttaataaaccttca
cctcaacatgctgactatcgagcttttgttgatttttttgatccaagtgtgggtcaaagg
gtcatgaataatctaaatggtgagtctgttgccgggaaacctttaaacgtacaagttgtg
ctgtgtacctcagtgcgatttacacctcagatatatagtgttgtttctgaggaagttgat
caagtcaaggccaatatagaacaagagttctcgcaagtggttcgttttgtacagaagcct
gacaagtatggcaatgtaatagttgagatacagtctactgatgttgaggcttttggagca
gcaaaatcattgctcaacaatctactcttacctgttgtacaggagtgtcagtctcctcta
ctttgtcactacattctctccaaattatctcgtaaagaattagacgacatacagtgtgcc
acaacaactgtcattatatgcaacacaagatcaatgactattagtatatatggaaataaa
tccaatcaagagcttgccaggtgtaaattagatgatcatattcagtacttggaaagtaga
ggtatctcaatccatgatatacacctcaaaggtcaaggcaaaccaccaggcctaatgaaa
cacattgtctcaacatttggtgttgatttgactggtttattatcactagaaggagttgaa
agtgctacattagagccacgaaagcaagtactgagtatgttttgttcgaatgatgcttat
gatcacattaaaaaggtaatctcagactactcggtctctaaacccaaagcaaatgcagca
gatgttctagaatgtagtatctgtctgtgtgagatagaggatgcgtctgaagtattttta
ttagagtattgtggccatgcctcacacattcagtgcatagcagtacaagttgctgctaat
gctgtcactttccctctacagtgctctgctgagggctgttctgaaagttttgtatggcaa
gattgtgagaatcttttcaagaaaacatcgttaacattggcaggattagtcgagtcatca
ttgaaatcgtttcttggtgctaatagagacaaggcaaggccctgccccactcctgattgt
cagatggtgtatgcagtttctaatgacggccaacgatttgtctgtccacattgtcagata
caaatctgcacgacatgtcacgagcagtaccatgatggtctcacatgtgagatgtacaag
agtagcaagaatgttgaaaataaatttcaagaatggctcaaggaaaacccgaaaaaccgt
aaacaatgccccaagtgtactattgccattgagaagacggaaggatgcaattacatgtat
tgcatacagtgccgcactcatatctgctgggtatgtacgaaaccatttgataatgaacaa
gactgttatgcacatttacacaaagtacatggtggtatacaataa
DBGET
integrated database retrieval system
