KEGG   Amphimedon queenslandica (sponge): 100632180
Entry
100632180         CDS       T02284                                 
Name
(RefSeq) THO complex subunit 2-like
  KO
K12879  THO complex subunit 2
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03013  Nucleocytoplasmic transport
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100632180
  09122 Translation
   03013 Nucleocytoplasmic transport
    100632180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqu03019]
    100632180
   03041 Spliceosome [BR:aqu03041]
    100632180
Messenger RNA biogenesis [BR:aqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100632180
Spliceosome [BR:aqu03041]
 Complex C
  Other components
   EJC/TREX
    100632180
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100632180
SSDB
Motif
Pfam: Tho2 Thoc2
Other DBs
NCBI-GeneID: 100632180
NCBI-ProteinID: XP_019860646
UniProt: A0AAN0JU34
LinkDB
Position
Unknown
AA seq 944 aa
MYYHVLSVLSQIQRYDNFIIPVVDSLKYLTPIAYDVLAYCIIEALGNPQKERLKLEDTNL
SIWLQILASFSANIFKKYPVDLTGLLQYVTNQLKAGKSFDLLVLKEVIQKMAGIEISDEI
TAAQLEAMAGGELLKVEGGYFSQVRNTKKSSQRLREALVDSNLCLPLCLLTAQQRDCIVY
RDGSHLHLKLVCSMYDNCMDTLVQFGGFLSSHLSPDEYSKRVPSLDTLIQEYRMTGDVAF
FLYRPKIFSSIGVKFAELEKSFKHFITSCEEVFGPIIESVRPLQPSKVWEDINCSFYVAF
WSLSLYDLHVPKERYNDEINKAKDAIQALENNQEMPASKKKKEQERSQALIDKLMEEKKR
QEDNHQLIISYLRNQKDSFINPRVLKSRTLNRLLQLCIFPRCRFTTLDAIYCAKFIQTLH
ILETPNFSTILLLDKLFSDVSCTVSACTENEVRRYGHFLYYLLEMIGRWHNSESIYMAEC
ANTQGFVSTMKSSASGNEKLNLDYENYRHVTHKWHYKITKSLVMCLESKDYIQIRNGLLL
LTKILPHYPKVEHLSLVLERRVGKIIEEEKDKRQDLYVLAIGYAGMLKTQAPNLIPETEF
HEKVIKKEEPDTLSNGKDEKPKPKPAPSSSQTSDKPKPPEKPKVSTKAPKVPEKVKSSEN
KVPTLPATEKPSSTERTEKPKSVPKPSEPKTDKISTPKTGGGGGSESKRTPSAERVSSTT
TPTATANNNNNATAKTGAAADKVEPKSSSKVDHKSTDSKTKQSEEVKTSKPVKTEPVSSQ
TTPTSDAKNIKKDEVIQATATSTTEPKKGVVTTPTLESKKVPMLSLEKLPSGRVTRPTDS
DSPRGQRRPHPTTTGGQSNSSETHDKDPKKRKVEETSTPAKAGHASSSPSTDKKVTTTTT
VAAATPTGGEGGDKTSGKTSNNVSTPKPERKRERLPDKDPPSNS
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgtattaccatgtattaagtgttctatctcagatccagcgttatgataatttcattatt
ccagtcgttgattctttgaagtacttgacgccaatagcttacgatgtactggcatattgt
atcatagaggcactgggtaacccacagaaagagcggttgaagctagaggatacaaacctc
tccatctggttacaaatactggcctctttctctgctaatatatttaagaaatacccagtg
gatctcaccggattattgcaatacgtaaccaatcagcttaaagcagggaagagttttgat
ctattggtgctaaaggaggtgatacagaagatggcaggtatagagattagtgatgagatt
acagctgctcagttggaggcaatggctggaggagagctactgaaagttgagggtggttat
ttttctcaagttcgtaacactaagaaatcatctcagcgtttacgtgaagcactagttgat
tctaacctttgtctccccttgtgtctactaacagcccagcaaagagactgtatagtctat
agagatgggagccatcttcacttgaagctagtctgctccatgtatgataattgtatggat
actctggttcagtttggtggtttcctctcatctcatttaagtcctgatgagtactcaaag
agagtcccttcactagataccctgatacaggagtacaggatgacaggggacgtagcgttc
ttcctttatagaccaaagatattctcaagcattggagtcaagtttgccgagttagagaaa
tcctttaaacacttcattacatcatgcgaggaagtctttggtccaattatagaatcagtc
agaccactccaaccgagcaaagtctgggaagacattaattgttcgttctatgttgctttc
tggtctctatccttatatgatcttcatgttcccaaggagcggtacaatgatgagatcaat
aaagctaaagatgctatacaggcactggagaacaatcaagaaatgccggccagtaagaag
aagaaagagcaggagcggtcccaggctctcattgataaactgatggaagagaagaagaga
caggaggacaaccatcagctgatcatcagctacttgaggaaccagaaggactcttttatc
aatccacgtgtccttaaaagtcgtacattgaatcgtctgttgcagctgtgtatattcccg
aggtgtcggttcactactcttgatgcaatatattgcgccaaattcatacaaacacttcac
attctggagacacctaacttctctacaatactgctactggataaattgttttctgatgtt
tcatgcactgtatctgcctgtactgagaatgaagtcagaagatatggtcatttcttgtac
tatttgcttgagatgatcggccgctggcataacagtgaatcaatttatatggctgaatgt
gctaatactcaaggttttgtctctacgatgaagtcctcagcctccggcaacgagaaactc
aatttagactatgagaactatcgtcacgtgacccacaaatggcactacaagataaccaaa
tccttagtgatgtgtctggagtccaaagactacattcaaatcaggaatggactgttgcta
ttaacaaagatcttgccacattatcctaaagtggagcatctctctttggtcctggagaga
agggttggtaagatcatcgaagaagagaaggacaaaagacaggatctttatgtactagca
attggttatgctggtatgctgaaaacacaagcccctaatcttattcctgagacagaattc
catgagaaggtcattaagaaggaggaacccgataccttgtcaaacggtaaagatgagaaa
cccaagcctaaaccagctccatcatcatctcaaacgagtgataaacccaaacctcctgaa
aaacccaaagtatcaactaaagctcccaaagtaccagaaaaagtgaaatcctccgaaaat
aaagtaccaactctgcccgctactgagaaaccctctagtactgaacggactgagaaacca
aagagtgttccaaaaccaagcgaaccaaagacagacaagattagtaccccaaaaactgga
ggaggaggaggttctgaatctaaaagaacccccagtgctgagagagtgtcatctaccact
acccctactgctactgctaataataataataatgctactgcaaagacaggagcagctgct
gataaagtagaacccaaatcatcgtctaaagttgatcacaaatcaactgattcaaaaacc
aaacaatcggaggaagtcaagacaagtaaacctgttaaaactgagcctgtttcgtcacaa
accacacctacttctgacgctaaaaatatcaagaaagatgaagtgattcaagccacagcc
actagtaccaccgaaccaaagaaaggtgtggtcaccacacccactcttgaatctaaaaaa
gtgcctatgttatctttagagaagttaccaagtgggcgtgtcactcgtccaactgattcc
gactcacctcgaggtcagaggagaccacacccaacaactacaggcggccaatcaaattca
tctgaaactcatgataaagatccaaagaaaagaaaggttgaggaaacatccacacccgct
aaagcgggacatgcctcctcctccccatcaactgataagaaggttactacaaccacaaca
gtagcagctgctactcctactggaggagaaggaggagataaaactagtggaaagacttca
aataatgtatctacaccaaaaccagagaggaaaagggagaggttacctgataaggatcct
cccagtaatagt

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