Amphimedon queenslandica (sponge): 100632180
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Entry
100632180 CDS
T02284
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03013
Nucleocytoplasmic transport
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100632180
09122 Translation
03013 Nucleocytoplasmic transport
100632180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100632180
03041 Spliceosome [BR:
aqu03041
]
100632180
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100632180
Spliceosome [BR:
aqu03041
]
Complex C
Other components
EJC/TREX
100632180
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100632180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
100632180
NCBI-ProteinID:
XP_019860646
UniProt:
A0AAN0JU34
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MYYHVLSVLSQIQRYDNFIIPVVDSLKYLTPIAYDVLAYCIIEALGNPQKERLKLEDTNL
SIWLQILASFSANIFKKYPVDLTGLLQYVTNQLKAGKSFDLLVLKEVIQKMAGIEISDEI
TAAQLEAMAGGELLKVEGGYFSQVRNTKKSSQRLREALVDSNLCLPLCLLTAQQRDCIVY
RDGSHLHLKLVCSMYDNCMDTLVQFGGFLSSHLSPDEYSKRVPSLDTLIQEYRMTGDVAF
FLYRPKIFSSIGVKFAELEKSFKHFITSCEEVFGPIIESVRPLQPSKVWEDINCSFYVAF
WSLSLYDLHVPKERYNDEINKAKDAIQALENNQEMPASKKKKEQERSQALIDKLMEEKKR
QEDNHQLIISYLRNQKDSFINPRVLKSRTLNRLLQLCIFPRCRFTTLDAIYCAKFIQTLH
ILETPNFSTILLLDKLFSDVSCTVSACTENEVRRYGHFLYYLLEMIGRWHNSESIYMAEC
ANTQGFVSTMKSSASGNEKLNLDYENYRHVTHKWHYKITKSLVMCLESKDYIQIRNGLLL
LTKILPHYPKVEHLSLVLERRVGKIIEEEKDKRQDLYVLAIGYAGMLKTQAPNLIPETEF
HEKVIKKEEPDTLSNGKDEKPKPKPAPSSSQTSDKPKPPEKPKVSTKAPKVPEKVKSSEN
KVPTLPATEKPSSTERTEKPKSVPKPSEPKTDKISTPKTGGGGGSESKRTPSAERVSSTT
TPTATANNNNNATAKTGAAADKVEPKSSSKVDHKSTDSKTKQSEEVKTSKPVKTEPVSSQ
TTPTSDAKNIKKDEVIQATATSTTEPKKGVVTTPTLESKKVPMLSLEKLPSGRVTRPTDS
DSPRGQRRPHPTTTGGQSNSSETHDKDPKKRKVEETSTPAKAGHASSSPSTDKKVTTTTT
VAAATPTGGEGGDKTSGKTSNNVSTPKPERKRERLPDKDPPSNS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtattaccatgtattaagtgttctatctcagatccagcgttatgataatttcattatt
ccagtcgttgattctttgaagtacttgacgccaatagcttacgatgtactggcatattgt
atcatagaggcactgggtaacccacagaaagagcggttgaagctagaggatacaaacctc
tccatctggttacaaatactggcctctttctctgctaatatatttaagaaatacccagtg
gatctcaccggattattgcaatacgtaaccaatcagcttaaagcagggaagagttttgat
ctattggtgctaaaggaggtgatacagaagatggcaggtatagagattagtgatgagatt
acagctgctcagttggaggcaatggctggaggagagctactgaaagttgagggtggttat
ttttctcaagttcgtaacactaagaaatcatctcagcgtttacgtgaagcactagttgat
tctaacctttgtctccccttgtgtctactaacagcccagcaaagagactgtatagtctat
agagatgggagccatcttcacttgaagctagtctgctccatgtatgataattgtatggat
actctggttcagtttggtggtttcctctcatctcatttaagtcctgatgagtactcaaag
agagtcccttcactagataccctgatacaggagtacaggatgacaggggacgtagcgttc
ttcctttatagaccaaagatattctcaagcattggagtcaagtttgccgagttagagaaa
tcctttaaacacttcattacatcatgcgaggaagtctttggtccaattatagaatcagtc
agaccactccaaccgagcaaagtctgggaagacattaattgttcgttctatgttgctttc
tggtctctatccttatatgatcttcatgttcccaaggagcggtacaatgatgagatcaat
aaagctaaagatgctatacaggcactggagaacaatcaagaaatgccggccagtaagaag
aagaaagagcaggagcggtcccaggctctcattgataaactgatggaagagaagaagaga
caggaggacaaccatcagctgatcatcagctacttgaggaaccagaaggactcttttatc
aatccacgtgtccttaaaagtcgtacattgaatcgtctgttgcagctgtgtatattcccg
aggtgtcggttcactactcttgatgcaatatattgcgccaaattcatacaaacacttcac
attctggagacacctaacttctctacaatactgctactggataaattgttttctgatgtt
tcatgcactgtatctgcctgtactgagaatgaagtcagaagatatggtcatttcttgtac
tatttgcttgagatgatcggccgctggcataacagtgaatcaatttatatggctgaatgt
gctaatactcaaggttttgtctctacgatgaagtcctcagcctccggcaacgagaaactc
aatttagactatgagaactatcgtcacgtgacccacaaatggcactacaagataaccaaa
tccttagtgatgtgtctggagtccaaagactacattcaaatcaggaatggactgttgcta
ttaacaaagatcttgccacattatcctaaagtggagcatctctctttggtcctggagaga
agggttggtaagatcatcgaagaagagaaggacaaaagacaggatctttatgtactagca
attggttatgctggtatgctgaaaacacaagcccctaatcttattcctgagacagaattc
catgagaaggtcattaagaaggaggaacccgataccttgtcaaacggtaaagatgagaaa
cccaagcctaaaccagctccatcatcatctcaaacgagtgataaacccaaacctcctgaa
aaacccaaagtatcaactaaagctcccaaagtaccagaaaaagtgaaatcctccgaaaat
aaagtaccaactctgcccgctactgagaaaccctctagtactgaacggactgagaaacca
aagagtgttccaaaaccaagcgaaccaaagacagacaagattagtaccccaaaaactgga
ggaggaggaggttctgaatctaaaagaacccccagtgctgagagagtgtcatctaccact
acccctactgctactgctaataataataataatgctactgcaaagacaggagcagctgct
gataaagtagaacccaaatcatcgtctaaagttgatcacaaatcaactgattcaaaaacc
aaacaatcggaggaagtcaagacaagtaaacctgttaaaactgagcctgtttcgtcacaa
accacacctacttctgacgctaaaaatatcaagaaagatgaagtgattcaagccacagcc
actagtaccaccgaaccaaagaaaggtgtggtcaccacacccactcttgaatctaaaaaa
gtgcctatgttatctttagagaagttaccaagtgggcgtgtcactcgtccaactgattcc
gactcacctcgaggtcagaggagaccacacccaacaactacaggcggccaatcaaattca
tctgaaactcatgataaagatccaaagaaaagaaaggttgaggaaacatccacacccgct
aaagcgggacatgcctcctcctccccatcaactgataagaaggttactacaaccacaaca
gtagcagctgctactcctactggaggagaaggaggagataaaactagtggaaagacttca
aataatgtatctacaccaaaaccagagaggaaaagggagaggttacctgataaggatcct
cccagtaatagt
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