Amphimedon queenslandica (sponge): 100632564
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Entry
100632564 CDS
T02284
Name
(RefSeq) splicing factor 3B subunit 3-like isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100632564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqu03021
]
100632564
03041 Spliceosome [BR:
aqu03041
]
100632564
03036 Chromosome and associated proteins [BR:
aqu03036
]
100632564
Transcription machinery [BR:
aqu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100632564
Spliceosome [BR:
aqu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100632564
Complex B
100632564
Complex C
U2 SnRNP specific factors
100632564
Chromosome and associated proteins [BR:
aqu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
100632564
TFTC complex
100632564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
100632564
NCBI-ProteinID:
XP_003382507
UniProt:
A0A1X7VVB2
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MHLYALTLQKPSCITAAVHGNFSGRKAQEVVVARGKVLELLRPDPNTGKVVELVSTEVFG
LIRSLITFRLTGSTKDYIVLGSDSGRIVILEYDPVKNVFEKVHQETYGKSGCRRIVPGQY
LAVDPKGRALMIGAVEKQKLVYILNRDSAARLTISSPLEAHKSHTLVYHVVGVDVGFENP
LFACLELDYEESDNDHTGEAAQVAQQNLTYYELDLGLNHVVRKYSEPLDDMANMLITVPG
GTDGPSGVLVCCENYIIYKNFGDQPDIRCPIPRRQNDLDDADRSMLIITSAMHKTKHLFF
FLLQSEQGDIFKVMLDVEDDIVVRIKIKYFDTVPVCSSLCVLKSGLLFCSSEFGNHYLYQ
IAHLGDDSEREFHSDYPLEEGETFFFGPRPLKNLILVDEMESLSPIMSCQIADLANEDTP
QLYAACGRGPRSSLRVLRHGLEVTEMAVSELPGNPHAVWTVKKDSKEDFDSYIVVSFMNA
TLILSIGETVEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHIRSDKRVNEWRSPGK
RLIRQCAVNEHQVVIALSGGEIVYFEMDQSGQLNEYTERKEMTAEVICISLGSVPPGQQR
CRFLAVGLSDQTVRIISLDPHDTLQPLSMQALPALPESLCIVNMSGNVSDDTTVSTGGLF
LNIGLQNGVLLRTALDNVTGDLSDTRTRYLGTRPVKLFRVRIQGTEGVIAVSSRTWLNYT
YQSRFHLTPLSYDLLEYASSFTSEQCPEGMVAISSNTLRILALEKLGVVFNQVSTPLQYT
PRKLLIHPPMSNLVLIETDHNAFTEATKLHRKKQMAEEMVSSAADDEKAEAAKAAEAFLA
EDLPEHMFGSPKAGRGMWASCLRVMHPNQGKTLDIVQFEQNEAAFSLAVCQFVSKGDLEW
FVVVGTAKDMIITPRAISSGSLIVFRLSPDGSKLEHVHTTQLDDVPIAMAPFQGRLLVGV
GKLLRIYDIGKKKMLRKCENKHLPYLVVDIKVMGRRVYVGDVQEAVHFLYYRPHENQLVI
FADEVVPRFCTTSCILDYNTVASADKFGNITILRLPSDVTDQVDEDPSGSRSLWDRGFLN
GATQKANVMTSYHVGEGINTLHKVSLIPGGSEVLVYTTLSGSIGILVPFSSKEDSDFFQH
LEMHMRSEWSNLVGRDHLSFRSYYVPVKSVIDGDLCEVYNSLDPSKRREIALDLDRSPSE
VAKKLEDLRTRYAF
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttatgccctcactctccagaagccatcatgcattacagcggccgttcacggg
aactttagtggtaggaaggcacaagaggttgtagtggctcgagggaaggtgctggagctg
ctcagaccggacccaaacacaggaaaggtagtcgagttggtatcaacagaagtatttggt
ttaatacgttccttaattacctttagattgactgggagcactaaagattacattgtcctg
ggcagcgactctggcaggattgttatattagaatatgatcctgtgaagaatgtctttgag
aaagtccaccaggaaacatacggtaaaagtggttgccgtaggatagtaccaggacagtac
cttgccgttgaccctaaaggacgtgctttaatgataggtgcagtagagaagcagaagttg
gtgtacatattgaatcgtgattctgctgctcgtctgaccatatcctctccactggaggca
cacaagagccatactttagtctatcatgtggttggggtcgatgtcgggtttgagaatcct
ttgtttgcttgtcttgaattggattatgaagagtcagacaatgatcacactggagaggca
gcacaagttgcacaacagaatttgacttactatgagctggatttgggtctcaatcatgtt
gtaaggaaatacagtgagccactcgatgacatggccaacatgctcataaccgtacctggt
ggtaccgatggccccagtggtgtgctggtctgctgtgagaactatatcatttataagaac
tttggtgaccagcctgacatacgttgccctatacctcgcaggcagaatgatcttgatgat
gccgacaggagcatgctcattataacaagtgccatgcataagacaaagcatttgttcttc
tttcttttacaatcagagcaaggcgacatatttaaggtgatgcttgatgtggaagacgac
atagttgttaggataaagattaagtattttgatactgttcctgtctgcagctcactctgt
gtcctcaagagtggattattattttgctcgtctgaatttggaaatcactacttgtatcaa
atagctcatttaggcgacgactcggagagagagttccactctgattatccactggaagaa
ggagagaccttcttctttggtccaaggcccttgaagaacctcatactcgtcgatgagatg
gagagtctctcaccaataatgtcatgccagattgctgatcttgctaatgaagacacaccc
caattatacgctgcttgtgggcgtggtcctcgctcatctctccgtgtattgcgtcatggt
cttgaggtcactgaaatggccgtctctgagttgccaggcaaccctcacgccgtatggact
gtgaagaaagactctaaagaggattttgattcatatattgttgtctccttcatgaatgcc
actctcattctttccattggggagactgtcgaggaagtgactgattccgggttcctgggg
accacgcccactctggcctgctctcaactgggagatgatgcactcattcagatataccct
gagggcattagacacatcaggtcagacaagcgtgtcaatgaatggcgtagtcctggtaag
aggttgatcagacagtgtgctgtcaacgagcatcaggtggtcattgctctctccggagga
gaaatcgtttattttgaaatggatcagtctggtcagttgaatgaatatacagagaggaag
gagatgactgctgaggtgatatgtatcagtttgggctcagtccctccaggccagcagagg
tgcaggttcttagctgtgggtctttcagatcagacagttcgtatcatctcactcgatcct
cacgacacgttgcagccattgagcatgcaggcattaccagcactaccggagtcattgtgc
atagtgaacatgagtgggaatgtcagtgatgataccacagtatccactggtggcctgttt
cttaatatcggactacaaaatggagtcttgctaagaacagctcttgataatgtcaccggg
gacctctctgatactagaacaaggtatctcggtacacgtcctgtgaaattatttcgcgtt
cgtattcaaggtacggagggtgtgatagcagtctccagtcgtacgtggttgaactacacg
tatcagtctcggttccatttgactcctctctcttacgacctcttggagtatgcatcatca
tttacctcagagcagtgccctgaaggaatggtagcaatatcatcaaacactcttaggatt
ttagctcttgagaaactgggtgtggtcttcaatcaagtgtccacgcccctccagtacact
cctaggaaactcctcattcacccgcccatgtctaatctagtgctgattgaaaccgatcac
aatgcttttaccgaagccaccaaactccaccgcaagaagcagatggcggaggagatggtc
tcgagtgctgctgatgatgaaaaggctgaagctgctaaggcggcagaggcttttcttgct
gaggatcttcctgagcatatgtttggttctcctaaggctggccgagggatgtgggcctct
tgcctgagggtgatgcacccaaaccaaggaaagactctggatattgtacagtttgaacag
aacgaggctgcctttagtcttgccgtctgtcagtttgtttccaaaggtgatcttgagtgg
tttgtggtcgtgggtactgctaaagatatgatcataactcctcgtgccatatccagtggg
tctctcattgtcttccgactatcacccgacggcagcaaactagagcatgtccacactact
cagttggatgatgtacctattgcgatggctccattccaaggtcgcttgttggtaggtgtt
ggtaaattacttcgtatttatgatatcgggaaaaagaaaatgctcaggaaatgcgaaaac
aagcatcttccatatttggtggttgatattaaagtcatgggtaggcgtgtctatgttggt
gatgttcaagaagcagttcatttcctatactacaggccacatgagaaccagctggtgata
tttgctgatgaggtagtccctagattctgcaccacttcctgtattcttgattacaatact
gttgccagtgccgataaatttggaaacattactatcttacgtcttccgagtgacgttacg
gatcaggttgatgaggatccttcagggagtcgctcactgtgggacagagggttccttaat
ggcgctacccaaaaggctaatgttatgacgtcctatcacgttggggagggtatcaacacc
ttgcacaaggtctcactaattccgggtggctccgaagtactagtctacacaactttaagt
ggtagcataggtatattggttccattctcttcaaaagaagattctgatttctttcaacat
cttgagatgcacatgagatcagagtggtctaaccttgttggtagggatcatctctctttt
cgttcttattatgttcctgttaaatctgtcattgatggagatttgtgtgaggtctataat
tcccttgatccttctaaaagacgagagatagctcttgatcttgatcgctctcccagtgaa
gttgcaaagaaacttgaagacttgcgaacaagatacgccttttga
DBGET
integrated database retrieval system
