Amphimedon queenslandica (sponge): 100632707 Help Entry 100632707         CDS       T02284                                  Name (RefSeq) 5'-3' exoribonuclease 1-like   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism aqu  Amphimedon queenslandica (sponge) Pathway aqu03008   Ribosome biogenesis in eukaryotes aqu03018   RNA degradation Brite KEGG Orthology (KO) [BR:aqu00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     100632707   09123 Folding, sorting and degradation    03018 RNA degradation     100632707  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aqu03019]     100632707    03009 Ribosome biogenesis [BR:aqu03009]     100632707    03016 Transfer RNA biogenesis [BR:aqu03016]     100632707    03036 Chromosome and associated proteins [BR:aqu03036]     100632707 Messenger RNA biogenesis [BR:aqu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      100632707   mRNA degradation factors    5'-3' decay     5' exonucleases      100632707 Ribosome biogenesis [BR:aqu03009]  Eukaryotic type   Pre-60S particles    RNases     100632707 Transfer RNA biogenesis [BR:aqu03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     100632707 Chromosome and associated proteins [BR:aqu03036]  Eukaryotic type   Gene silencing    piRNA pathway     100632707 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 Motif Other DBs NCBI-GeneID:  100632707 NCBI-ProteinID:  XP_019853031 UniProt:  A0A1X7UQD8 LinkDB All DBs Position Unknown AA seq 1677 aa AA seqDB search MGVPKFYRWISERYPCLSQVVTDYQIPEFDNFYLDMNGIIHSCSHPNDNDPLFRISDEKI FSDIFHYLEVLFRIIKPQKVLFMAIDGVAPRAKMNQQRGRRFRSAKEAEEQMKKAIMKGV DLPSDARFDSNCITPGTLFMARLSDHLKYFINQKLSTDESWQKVEIIFSGHEVPGEGEHK IMDFIRYSKAQPDYDPNTRHCLYGLDADLIMLGMATHEPHFSLLREEVKFGKNQKKQASV DTITFHLLHLSILREYLYYEFCSIKDHIPFSFDLEAIIDDWIFMGFMVGNDFIPHLPNMH IKQEVLPFLYKIYKETLPKLNGYINENGKLNMERAEEYFSAVAKFDEDHFSDIISDIKWM ESKKQKHKQSSSPDDTSAHSMPFSGTVNETEVDEKLKRDLGISDLEDYFEKEDIDASDQF MADFSSFKAQYYSDKFMLTDVSTPAINEIAKCYVVGIQWILSYYYTGVPSWSWFYPYHYA PFVSDLKVVGDMTIDFQLGVPFLPFEQLLAVLPANSKSLLPEAYQSLMVNTDSPLLDFYP ANFDIDLNGKQHDWEGVVLIPFIDEERLLHAMKPLSAYLNEDEIRRNCHGSCFVYRYVKS APSLIYPSPWPTKFPDIQNCKAKCLTLSSTAYKVEESELVFGLCPSVKLDVFFPGFPTLK HVNHEAFFESRGIRVFQTLSRGESVCLRVKQNASTLKDAVDIAEELIGHVVYVRWPYLIE SKVCSVSDGEVTYYNDKMRHSGNKGRVVQRALTDEDKKLWRDAIVTLSKESSSRRGIDIG DIQVLVYVEELQGKRYVCDKSGPRGIMSLEKQWSASSTPYPLQTIVRNITDSAPEYCDKL KTLDELFEIGTQCFVLYPPYYGEQAEIVSVDLKRNKIGVQFSLVTEPDLSFAIRNYDRLN TQYCSIGQMAQRLNLDPVLVARITSSIYCEKGSSENKKERERINIGLNMKFSTRNKELVG YAKRTNRGTWLLSPSAESILIEYMQKFPLMFSVLNSHPRNDKYYEADLFSADNPNESIAC VKEWLKSLPINDLTPVECGSDTLNTFHIENIEKSVNSVKVLKSKKFLTLKYNPSQLYKPG DHQGGLIPDEHSDYYLFDRVVNVASNGVVPFGLRGTVTGISGDGKDNKTLYEVIFDEEFL GGLSLRCSGAKAYHLPPSCLLNLSYGKRWENESKPMGHSTSSYTHSSGPVSDKPVMPPSY SDVTSSKSNRSRSYNEVKPFSRAKDFVGTRSMEGRTLALSSRNEGKKILAKRKENVTKAS EFDLMRKSMDNPSSAPRLVTPLEMSRPPQQSLGTNVPHPVMINNLSDKDLELHGSAMTTS INDSSPDISPLTISDPALSSTCNQDSATSTSLSPSVAAIFNLKELKTVPLSSDKYHKEDT AECTPSVTKHSGFIKFSSSFAPSVAAVFDASAEANTSQNIHVHASKNPVSSGSSNVSTFA PSVAAVFAHHESDKNDPAVPTFSSEKKQQEVNLKSLLGISPTQQMQKPFAHFSQTQSQPK LQPPRPRGPSGGVYSYPNGPIMSTGFPVTGISSQHPPNHSVRPYVPYRPYTNPMELRPVS HAYPTMWQHPPLQPPYYFKAPPTVPIINAPHPRGPSIPPYRSSLNPHSIPFTPPQVLLKH GAKLSSHIPSQEDEERPMTQHYNTPSRVEAKEVEAIEATISSKEETPHVVGTIIPDI NT seq 5034 nt NT seq  +upstreamnt  +downstreamnt atgggtgtgccgaagttttatcgttggataagtgaacgttatccttgtcttagccaagta gtgacggattatcagattcctgagtttgacaatttttatcttgacatgaatgggataatt cattcttgctcacatcctaatgacaatgatcctttgtttcgtatctcagatgaaaaaatt tttagtgatatttttcattacttggaagttttgtttcgtataattaaacctcaaaaagta ttgtttatggccattgatggagtagcaccacgtgctaagatgaatcaacaaagggggagg agatttaggtcggctaaagaagcggaggagcagatgaaaaaagctatcatgaaaggagtt gatttaccatctgatgcccggtttgactctaactgtatcactccaggtacactgtttatg gcaagacttagtgaccacctgaaatatttcattaaccaaaagctgtctactgatgaatcc tggcagaaagtagaaattattttttctgggcatgaagtaccgggagagggagagcataaa attatggattttattcgatacagcaaagctcagcctgattatgatccaaatactcgacac tgtctctacggtctggatgcagatctgattatgctaggcatggcgacacatgaacctcat ttctctcttttgagagaagaagtcaagtttggaaaaaaccaaaagaagcaagcttctgtt gacaccattacttttcaccttcttcatctatctattttgagggaatatctgtattatgag ttctgttccattaaggatcacataccattttcatttgacctagaggccataatagatgac tggatatttatgggttttatggtagggaatgattttataccacatttaccaaatatgcat attaaacaagaggttcttccctttttgtacaaaatttataaggaaaccttacctaaatta aatggttatattaatgaaaatggtaagcttaatatggaaagggctgaggaatatttctca gctgttgctaaatttgatgaagaccatttttctgatatcatttctgacataaagtggatg gagtctaagaagcaaaagcacaaacaaagtagttcacctgatgatacttctgctcatagt atgccattttctggtactgtaaatgaaacagaagttgatgagaaattaaagagagatctt ggcatatctgaccttgaggattattttgagaaagaagatatagatgcatctgatcagttt atggcagatttctcttcctttaaagctcagtactatagtgataaatttatgttaacagat gtgtctactcctgctattaatgaaatagctaagtgctatgttgttggtattcagtggata ttgagttattactatactggggtaccgtcatggagctggttttatccttatcattatgcc ccatttgtgtcagatcttaaagtagttggtgatatgacaattgactttcaacttggtgta ccatttcttccctttgagcagttgcttgctgttttaccagcaaatagcaaatcccttttg cctgaagcttatcagagtttaatggtgaacactgattctccattacttgatttctatcct gctaattttgacattgatttaaatggaaagcaacatgactgggaaggtgttgtattgatt ccttttattgatgaggaacgcctacttcatgcaatgaagccacttagtgcatacctgaat gaggatgaaattagaaggaactgtcatgggtcttgttttgtgtatcgttatgtgaaaagt gctccttcattaatttatccatcaccttggcctactaaatttcctgatattcaaaattgc aaagcaaagtgcttgacattatcctctactgcttataaagttgaagaatcagaattagtc tttggcctgtgtccttctgtgaagctggatgtatttttccctggttttcctactctaaaa catgtgaatcatgaggctttttttgaaagcagaggtattcgagtttttcagacccttagc agaggagaaagtgtatgtcttcgtgtaaagcaaaatgcatccacattgaaggatgcagtt gatattgctgaggaactcattggtcatgttgtctatgtgcgttggccatatcttattgag tctaaagtgtgttcagtctctgatggggaagttacttattataatgataaaatgagacat agtggaaataaaggtcgagtagtgcaacgagctctcactgatgaagataaaaaactttgg agggatgcaattgtcactctcagtaaagagtcgagttctagacgaggtattgatattggt gatatacaggtattagtatatgttgaggagcttcaaggaaagagatatgtgtgtgataaa tctggtcctagaggtatcatgtcactagagaagcagtggagtgctagttctacaccttac cctttgcaaactatagttcggaatattactgattctgcacccgaatattgtgataaattg aagacacttgatgaattatttgaaattggtactcagtgtttcgtattatatcccccttat tatggtgaacaggctgaaattgtgtcagtagatcttaaacgcaacaaaattggtgttcaa ttttctttagttacagaacctgacttgtcctttgctattcgtaattatgacagactgaat actcaatattgctccattggacaaatggctcagaggttgaatctagatccagttttggtg gctcgtattacctcttcaatatattgtgagaaaggatcatctgaaaacaagaaggaacgt gaacgaattaatataggcctaaatatgaagttttctactcgcaacaaagagttggttgga tatgctaaaaggactaatagaggaacctggttattgtcaccatctgctgagagtatttta attgaatatatgcaaaagtttccactgatgttttctgtgttgaatagtcacccaagaaat gacaagtattatgaggctgacctattctcagctgataatcccaatgaatcaatagcttgt gttaaagagtggcttaagtctcttcctatcaatgacctaactccagtggaatgtggtagt gatactcttaatactttccatattgaaaacattgaaaaatcagttaattctgttaaggtt ttgaaatcaaagaagtttcttacattgaaatacaatccatctcaactttacaaaccaggt gatcaccagggaggtttgataccagacgagcattctgattattacctgtttgatcgagta gttaatgttgctagtaatggagtggttccttttggtttaaggggcactgtgactggaata tcaggagatggaaaagataataagacattgtatgaagtcatttttgatgaggagtttctt ggaggtttatcacttcgttgttcaggtgcaaaagcatatcatttacctccttcttgcctc ttaaatttatcatatggcaaaagatgggaaaatgagagtaaacccatgggtcattcaacc agcagttatacacactctagtggacctgtttctgataaacctgttatgcctcctagttac tctgatgtaacttcctctaaatcgaaccgaagcaggtcatataatgaagtcaagccattt tctcgtgcaaaagatttcgttggaacaagaagtatggaaggtagaactttagcattaagt tctagaaatgaaggaaagaagatattggctaaaagaaaagaaaacgtgactaaagcttct gaattcgatctaatgaggaaatcaatggacaatccaagttctgcccctcgtttagttaca cctcttgaaatgtctcgtcctcctcaacaatctcttggcactaatgtgcctcatcctgtc atgattaataatttgtctgacaaagatttagaattacacggcagtgctatgactactagt ataaatgattctagtccggatatttctcctctaaccatttccgatccagccctaagcagt acatgtaatcaggattctgcaactagtacttctttatcgccatctgtggctgctatattt aacctgaaagaactcaaaacagttccgctctcatcagacaagtatcataaggaagatact gctgaatgcacaccctctgttacaaagcattctggtttcatcaagttttcatcttccttt gccccttcagttgcagctgtatttgatgcaagtgctgaagctaataccagccaaaatata catgtacatgcatcaaaaaatccagtgtcatctggttcttctaatgtttccacttttgct ccatcagttgctgcagtttttgctcatcatgaatctgataaaaatgatccagcagtacca acattttcttctgaaaagaaacagcaagaagtcaatctaaaaagccttttaggcatatct cctacacagcaaatgcagaaaccttttgctcacttctcacagacacaaagtcagccaaaa ttgcaaccacccagacctagaggaccaagtggtggtgtctactcatatcccaatggtcca atcatgagtactggttttcctgttacaggcatatcgtctcagcatcctccaaaccattct gtcaggccatatgtgccatacaggccatatactaatccaatggaattacgtccagtatct catgcctatcctacaatgtggcagcatcctccattacaacctccttattattttaaggca ccacctacagttccaataattaatgctccacatccacgtggtccttcaataccaccatat agatcatctctaaatccacattccattcctttcactccaccacaggtcttattaaaacat ggcgctaagttgtcatctcatattccttctcaggaagatgaggaacgcccaatgactcaa cattacaatacaccaagtcgtgtagaagcaaaagaagtagaggctattgaggccacaatt tcatctaaagaggagactccacatgtggttggcactataattcctgacatctaa

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