KEGG   Amphimedon queenslandica (sponge): 100632867
Entry
100632867         CDS       T02284                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03013  Nucleocytoplasmic transport
aqu03015  mRNA surveillance pathway
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100632867
  09122 Translation
   03013 Nucleocytoplasmic transport
    100632867
   03015 mRNA surveillance pathway
    100632867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqu03019]
    100632867
   03041 Spliceosome [BR:aqu03041]
    100632867
Messenger RNA biogenesis [BR:aqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100632867
    TREX complex
     100632867
Spliceosome [BR:aqu03041]
 Complex C
  Other components
   EJC/TREX
    100632867
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100632867
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 Btz
Other DBs
NCBI-GeneID: 100632867
NCBI-ProteinID: XP_003384498
UniProt: A0A1X7VEL4
LinkDB
Position
Unknown
AA seq 246 aa
MEYMVDQPLDAFIQTRKGRGRGGRGRGRGGRGRGGGGPARRNSFGGGRGGGGGFRRQSNR
PQRQMAGKWQHDMYQGDFNGSAQVQTPAKSGGTKLLISNLDYGVSDDDIKELFREFGRLR
KAEVHYDKSGRSVGTAQVIFERNVDALKAVKQYNGVPLDGRPMSIQLMDGSGAAKTFTST
PNKPNIKQRVGQRLSGGGRGGFARGGGRGRGRGRGGRGGKKEEVPTAEELDADLEAYKQS
TDSWTA
NT seq 741 nt   +upstreamnt  +downstreamnt
atggagtacatggtagatcaacctttggatgctttcatacagaccaggaaaggaaggggt
cgtggtggtagaggacgtggtcgaggaggtagaggtcgtggtgggggtggtccagctaga
cgtaattcattcggaggtggaagaggaggaggaggaggattccgtcgtcaatccaatcga
cctcaacgccagatggccgggaaatggcaacacgacatgtaccaaggcgattttaatgga
agcgctcaggtccaaactcccgccaaatccggtggtaccaaactactcatttcgaatctt
gattatggagtctctgatgatgatattaaggagctctttagggagtttggacgtctgagg
aaagccgaggtacactacgacaagagtgggcggtctgtgggtacagctcaagtcattttt
gagaggaatgtggatgccctaaaagctgttaagcaatacaacggagtccctcttgatgga
cgtccaatgtctatacaattaatggatgggtctggagctgccaaaaccttcacatcaact
cccaacaagcctaatattaagcaaagggtcgggcagcgtctctctggtggtggtagagga
ggttttgctaggggaggtggtagaggaaggggacgtggtagaggaggacgaggcggtaag
aaagaggaggtcccaactgcagaagagttggatgcagatttagaagcatacaaacagtca
actgattcatggacagcttga

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