Amphimedon queenslandica (sponge): 100633205
Help
Entry
100633205 CDS
T02284
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100633205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100633205
03012 Translation factors [BR:
aqu03012
]
100633205
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100633205
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100633205
Translation factors [BR:
aqu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100633205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Thioredoxin_8
OB_NTP_bind
AhpC-TSA
Thioredoxin_2
HA2_C
Thioredoxin
Redoxin
Helicase_C
DEAD
HA2_N
SCO1-SenC
nSTAND3
ATPase
AAA_22
AAA_19
NPHP3_N
NACHT
NB-ARC
AAA_23
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
100633205
NCBI-ProteinID:
XP_019848712
UniProt:
A0AAN0IVY4
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MWRTPSLSYSFSSSVRLQRSFKSIMADYGRGAWPGRGRGGGRGRGGRGGGGRGGGGGGRG
GHPSGLKGKDIGLYYAKRGKERKVARERNERAVVSIDRRSEREITQILQDIDGTNEPMEE
SDGQEKEGASLQYPSVATPILTTPTHTDEELLKEQRQRESRPAYKKMMEFRQALPSWGMK
DEIVQAVNDNQVIVISGQTGCGKTTQISQFLLDDAIGRGCGSKCHVICTQPRRISAISVA
QRVAAERAESLGTSVGYQIRLEGTLPRDNGSILYCTTGIMVRRLASDPLLQNVSHLILDE
VHERNNITDFLSIIVKDIIPKKPDLKVILMSATINAELFSNYFNNAPIISIPGRVFPVKE
HFLEDVISLTRYRPPQNQGRSRPFWSRYGRGRQEWEEEQSLKAEAEEYLNEVERDQKYGP
HVASALRDMDLEKIDLHLIHSLLKHISFNMEDGAILVFLPGWDTISKLHDLLRSDGMFRN
SSKFLIIPLHSMMPTTSQKEVFDRPPPGVRKIIIATNIAETSITIDDVVFVIDGGKVKET
TYDVANQLACLESVWESKAAATQRKGRAGRVQPGHCFYLFTSHQYSKLNEFQLPEMLRTP
LEELVLQIKMLHLGKAEPFLSKALEPPETKSIHDAVDLLKNLNALDVNEELTPLGYHLAN
LPVHPRVGRMILFGAMLSCLDPVLTIAAALGFKEPFVIPLHKQEEADRMKKELARGSESD
HIALLNAFNGWEQSRRHGNTRQYCWDHFLSSNTLELLSNMKRQFAGLLHEIGFVSDSNPK
TPSANHNSDNVKLIKAILCAGLYPNVAKITPGKRVAKLYTQQDGKVKFHPKSVNSEQGNF
KSQFLIYHTKVKSTAIFIHDASVIPPFPLLFFGGEIAAGRDADQETITVDKWIIFQAPTR
IADLVKDMRHQLDSVLKQKIAQPQMTLYSPGPSHSVTPTSRLIQAIIDLITSEDYSAQQE
RLAQGKHLYPRKQGAMASSLFTGVSSLNSSKTDSIPVSSLDGEGKVVGLYFSAHWCPPCR
GFTPKLAEWYTKLTSGALKDKLEIVFVSSDRDEESFDKYFAEMPWLALPYSERDMKATLS
KKYKIQGIPTLVIVSGADGSLITKEGRSVISQDPNGEKFPWKPETLVEIMSSCKFTNKEG
KEISWGDCKGKTVGLYFSAHWCQPCITFTPELATFYNKMKTDGKEFEIIFSSSDHSAEDF
EEHLSSMPWYAIPFGHEASKKIAKQFEIDGIPTLVIVDGTTGHVITETGRGMINIDPKGE
DFPWYPKPVEVLHDGKVDDLNTRPSMIWFTDGSEDQVKAAKSAMTPVAAPYFEKNKDNND
SLCFLYTINNSLESNIRKLLQISDTPSLVIVNISSDAGPSKAVYGGPELNQEAVKNFFKE
FEEKSLSFEVLQ
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggaccccatctctctcctactcgttttcaagttcagtcagactgcaaagaagt
tttaaatcaatcatggcagactatggaagaggagcctggccaggaagaggtagaggagga
gggagagggaggggagggagaggaggaggagggaggggtggaggaggaggtggtaggggt
ggtcacccttcaggactaaaagggaaggatatcggtttgtattatgctaaacgagggaag
gaacgtaaagtagcaagagaaagaaatgaacgagctgttgtttcaattgatagaagatca
gaaagagaaataacgcaaatactccaagatattgatggaacaaacgaaccaatggaggaa
tctgatggacaggaaaaagaaggtgcctcactccaatatccctcagtggccacacctatt
ttgaccacacctactcacactgacgaagaactgctaaaagaacagagacaaagagagagt
cgacctgcctataaaaaaatgatggaattccgccaggccctcccctcttggggcatgaag
gacgagatagttcaagcagttaatgataatcaggtcattgtcattagtggacaaaccggc
tgtggaaaaacaacacagatttctcagtttctattggacgatgctataggaagagggtgt
ggctccaaatgccatgtgatctgtacccagccgagacggatcagcgcaatatcagtggct
cagagggtagccgcagaacgggcggagtccttaggtacttcagtcggttaccagatcagg
ctagagggtacactgccgagggacaatgggtcgatactttactgtaccactggtataatg
gtcaggagactggcctcagaccctttgcttcaaaacgtatctcatctcatacttgatgaa
gttcacgagagaaacaacataactgacttcctgtcgataattgtgaaagacataatacca
aagaagcctgatcttaaggtcatcctaatgagtgctaccattaatgcagaactattttca
aattacttcaataatgctcccattatttctattcctggtcgtgttttccccgtgaaagaa
cactttcttgaagacgtcatctcactaacaagatatcgtccacctcagaaccagggaagg
tcacgcccattttggtctcgttatgggcgtggtcgacaagagtgggaggaggagcaatca
ctgaaggcggaggctgaggaatatttaaatgaagttgagagagatcagaaatatggacct
catgtggcatcagctttgagagacatggatctggagaagattgacctccatttaatccac
tctcttttaaaacacatatccttcaatatggaggacggagcgatcctggtgtttctacca
ggctgggacactatcagcaagttgcatgatttgcttcggagcgacggaatgtttcggaat
tcttcgaaatttttgataattccacttcactctatgatgccaactacatcccagaaggaa
gtttttgatcgcccgccccctggggttcgtaagattataatagccactaatatagcagag
actagtatcaccattgatgatgtggtctttgttatcgatggagggaaagtcaaggaaact
acgtatgatgttgcgaatcagttagcttgtctagagtcggtttgggaaagtaaagcagct
gccactcaaagaaaaggacgggcaggaagagtccaaccaggccactgcttctacctcttc
acttctcatcaatattctaaactgaacgagttccagctgccagaaatgctaaggactcca
ctcgaagaactcgtcctccaaattaagatgcttcatttaggaaaggccgagccgttcctc
tccaaagctcttgagcctccggaaactaaatcaatccacgacgcagtagacctgcttaag
aacttaaatgctctggatgtaaatgaggagttaaccccattaggctatcacttagctaac
ctccctgttcacccaagggttggtagaatgatcctttttggggcaatgctttcttgcctg
gaccctgtactgaccattgcagctgctcttgggtttaaagaacctttcgtaataccactg
cacaaacaagaagaggcagacaggatgaagaaggagttagctcggggtagtgagagtgac
cacattgcattactgaatgcttttaatgggtgggaacaaagccgtcgtcatggcaacaca
cgtcaatactgctgggaccacttcctgtcatcaaacactttagagttactaagtaacatg
aagagacagtttgctggtttgttgcacgagattggttttgtgtctgattctaatccaaag
acaccatcagctaatcacaactcagataatgtcaagttaataaaagctattctatgcgct
gggctctacccaaatgtagctaaaatcactcctggaaaaagagtagcaaagttgtatacg
cagcaggatggaaaggttaagtttcatccgaaatccgtcaactctgaacaaggaaatttt
aaatcacaatttctcatttatcatacaaaagttaaaagtactgccatatttattcacgat
gcttctgtcattcctcctttccctcttctgttttttggtggtgagatagcagctggaaga
gatgctgaccaagagacaatcactgttgacaagtggatcatatttcaggctccaacacgc
attgctgatctcgtaaaggacatgcgtcatcagctggactccgtcttaaagcagaaaatt
gcacaacctcagatgactctttattctcctggcccctcccactcagtgacgcccacttct
cgtttaatccaagcaatcatagacttgataactagtgaggattactcggcacaacaggaa
agactcgctcaaggaaaacacttgtacccacgaaaacaaggggccatggcaagctctctc
tttactggagtctcttctctaaacagcagcaagacagacagtattccagtgagtagtctt
gatggagaaggcaaggtggtagggctgtacttcagtgcccactggtgtccaccatgccgg
ggattcactcctaagctcgccgaatggtacactaaactaaccagtggagcactaaaggat
aagctggagatcgtctttgttagctctgatagagatgaagaatcttttgacaaatatttt
gcagagatgccttggcttgcattaccatactctgaaagagatatgaaggctaccctcagt
aaaaaatataaaatccaagggataccgacactagttattgtgagtggggccgacggtagc
ttaatcacaaaggaaggacgctctgtcatatctcaagacccaaatggagagaagtttcct
tggaagccagagacactggtagagataatgtctagttgtaagttcactaataaggaagga
aaggaaattagctggggtgactgcaaggggaagacagtagggctgtacttttcagctcat
tggtgccaaccttgcattacatttacgccagaacttgctactttttacaataaaatgaag
acagatggaaaggagtttgagatcatcttttcctcatctgaccattcagcggaagacttt
gaggagcatctctcatcaatgccttggtatgctataccatttggtcatgaggcaagcaag
aagattgcaaaacagtttgagattgatggtataccaactctagtcatagttgatggtacg
actggtcacgtgatcactgagactggtcgagggatgattaacattgatcccaaaggagaa
gatttcccgtggtatcctaaaccagttgaagtccttcatgatggaaaggttgacgatctt
aacacacgacctagcatgatttggtttacagatggcagtgaagatcaggtaaaggctgca
aaatcagcaatgactcctgtagcagcgccatatttcgaaaaaaacaaagataacaatgat
tctctgtgttttctatacactattaataattccttggaaagcaacatacggaaattactc
cagatatctgacactccttctcttgtcattgttaatatatcttctgatgctggtccaagc
aaggctgtatatggtggccctgagctcaaccaagaggctgtcaaaaatttttttaaagag
tttgaagaaaaatctttgtcatttgaggtcctgcaataa
DBGET
integrated database retrieval system
