Amphimedon queenslandica (sponge): 100633418
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Entry
100633418 CDS
T02284
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100633418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqu03021
]
100633418
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100633418
Transcription machinery [BR:
aqu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100633418
RNA polymerase I system
100633418
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100633418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW5_SPT5
KOW2_Spt5
Spt5-NGN
KOW7_SPT5
KOWx_SPT5
KOW1_SPT5
KOW6_SPT5
Spt5_N
GPKOW_C
DUF3912
DUF6897
AbiEi_4
Motif
Other DBs
NCBI-GeneID:
100633418
NCBI-ProteinID:
XP_011410252
UniProt:
A0A1X7VJR0
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MSDSEESAFSEEEEEEEEEEEDDEEEEREYGHFKKRPRSEFIQDEAEETDDEEDEYEEEE
HDFVKMTSGPRDKGVYDERDVTGARNLMLKTILTEENEDEVEAYLKQKYASAPSASVEEM
EEQPREIIQQSLLPGVKDPNLWTVKCRIGTEKETVMTLMRKFITLQTTDTPLLIKSATAV
EGLHGYIYVESYKQQHVKQAIEDIGNLAMGKWNQMMVPVNEMTDVLRVVKDSASRNLRQG
SWVRIKRGIYRDDIAQVDYVDTSRNKVVLKMLPRVDYTSKKGALKGTDDDANRKRRKSRP
PAKLFDPEAIRELGGLISYDGDFLVFEGNHFRNGFMYKQFGMNAIIFEGVKPTLGELEKF
EATPEEVEVEVSGSAIGAAGLEPGDLVEVCEGDLMHLQGSVISIDGNNVTVLPKHEDLRD
PLEFNISELRKFFQVGDHVKVIAGRHEGETGLVVRIENNLAIIFVDLTMHELKVRPRDLQ
LCLEKSSGVDTSGHFQLGDLVMLDQQTVGVITRMEKEVFKVLTQHGKEQSVKQHSVQLRK
TRAVALDSHQNSISAKDIVRVVKGTHIGKQGEVKHVYKGYVFIHARNVMENGGVIVTRSK
DLELAGSTSNAQALTGFQSPRLASPSPHRGGGRGRGGRGGGGGGGRFNTRDTSLIGKTVK
IIQGPYKGYVGIVKDCTDSTARVELHTKCQTINVDKTRLSVITGQESAGMMSSWGRTPQF
GAATPAYGNMTPLPGGGGRTPLYGSMTPSHSGDGGRTPSYNNPGYMTPSHDPSRTPLHGG
SAWDPSITNTPARTDEWTNYGSAPSPSGTYANPATPGSVQYDNPSTPSAYIADSPQSNSS
SHYGSHYSARTPMYSSDYKYTPSPTNYNPMTPGSNLEYSPRTPGSPLDTGDLGFPPDIEV
MVKDLYHDSSLAGKVGVIKSAVGGRVSVYLYDDGQDVDIPMSFLTHVPPMKGDKIKCIKG
VHTGNTGYLMNIDEGDGIVKLDSDGSLKIITLNELAKLVTRT
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagtgaggagtccgcctttagtgaagaagaggaggaggaggaggaggaagaa
gaagatgatgaagaagaagaaagagagtatggacactttaagaaacgtccaagatctgaa
ttcattcaagatgaagctgaggagactgatgatgaagaagatgaatatgaagaagaggaa
cacgactttgtcaagatgacatccggtccaagagataaaggtgtgtatgatgagagggat
gtcacaggtgccaggaacctcatgttaaagacgatacttacggaagagaacgaggacgag
gtggaggcttatcttaaacagaaatatgcttcagctccttcggctagtgttgaggaaatg
gaggaacagccaagagaaataatacaacagagtttgttaccaggtgtcaaagatccaaac
ttgtggactgttaagtgcaggataggtacagagaaagagacagtgatgactttaatgagg
aaattcattacattacaaaccactgatacacctctccttattaagagtgctacagctgtt
gaaggtctccatggttacatatacgttgaatcttacaagcagcagcacgtcaaacaagcg
atagaggacattggtaacctggcgatgggcaaatggaaccagatgatggttccggtcaat
gaaatgacggacgtccttcgtgtggtcaaggactcggccagtcgtaacctgcggcaagga
tcctgggtcaggatcaagagggggatatacagggatgatattgcacaggttgattatgtt
gatacttcacgtaataaggtggtcttgaagatgctccctcgggttgactatacttcgaag
aaaggagctctcaaaggaactgatgatgatgctaataggaagagaagaaaatcacgacca
cctgctaaactgtttgatccagaggccatcagagagttaggaggactgatatcttatgat
ggagactttctcgtgtttgaaggaaatcactttagaaacgggttcatgtacaagcagttt
ggaatgaacgccattatttttgaaggagtcaagcctacattaggtgaactagaaaagttt
gaagcgacacctgaagaagttgaagtagaagtgagcggtagtgccattggagcagctggt
cttgagcctggtgacctcgttgaagtctgtgaaggcgacctcatgcacctccaggggtca
gtgatatcgattgatgggaataatgtgacggttttaccaaaacacgaggacttacgagat
ccgctggagtttaacatatcagaattgaggaagttctttcaagttggggatcacgttaaa
gtgattgcagggagacacgagggggagacggggctggtcgttaggattgaaaataacttg
gcaatcatctttgtagacctaacaatgcatgagttgaaggtaaggccgagagaccttcag
ttgtgtcttgagaaaagcagcggagtggacacctcaggtcacttccaactgggagatctt
gtcatgttggaccagcagactgttggggtcatcactagaatggagaaagaggttttcaaa
gtgctgactcagcacggtaaagagcaaagcgtcaaacagcactcagtccaactgaggaag
accagagccgtagcactggactcacaccagaactcaatttctgctaaagacattgtgaga
gttgtcaaagggacacatattggtaaacaaggtgaagttaaacacgtctacaaaggatac
gtcttcattcatgcacgaaatgtcatggaaaatggcggagtcatagtcacccgttcgaag
gaccttgagctagctggtagtaccagtaacgctcaggcgctcactgggtttcagagtcct
cgactggctagtcctagtcctcatagagggggtgggcggggcagaggaggccgtggcggg
ggaggaggaggaggaaggttcaatactcgtgacacgtcactcattgggaaaactgttaag
ataatacagggaccctacaaaggttatgtcggtatcgttaaagactgcactgattcaact
gctcgtgttgaattacatacaaaatgtcaaacaatcaacgttgacaagacacgcctctca
gtcataacaggtcaagagagtgctggtatgatgtcttcttgggggcgtacccctcaattt
ggagctgctaccccggcctatggtaacatgaccccattaccaggaggaggagggaggact
cctctctatgggtcaatgacaccttctcatagtggagatggtggtcgtacccctagttac
aataaccctggttacatgaccccgtcacatgatccttcccgcactcctctccatggaggc
agtgcttgggatccaagtattaccaacactccagcgagaactgatgaatggaccaactat
ggatcagcaccttcaccttcagggacgtatgctaacccagcaacaccaggtagtgtccag
tatgacaaccccagcactcccagtgcatacattgctgactcaccccagagtaactcttct
tcacattacggatcacactacagtgccaggacccccatgtactcatctgattacaaatac
actccgtctcctaccaattataatccaatgacccccgggagcaatcttgaatatagtccc
aggacccctgggagcccccttgacactggtgaccttggctttcctcctgatattgaagtt
atggtcaaagacctttatcacgattccagtctagctggtaaagtgggcgtgatcaagagt
gccgttggtgggcgtgtctctgtatatctctatgacgacggtcaggacgtggacatacca
atgtccttccttacccacgtgccaccgatgaaaggagacaagataaagtgtattaaagga
gttcatactggcaatactggatacctcatgaatattgatgagggagacggtatcgtcaaa
ctagattctgacggttcccttaagatcataactcttaatgaactagctaaactcgttacc
aggacctga
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integrated database retrieval system
