Amphimedon queenslandica (sponge): 100633563
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Entry
100633563 CDS
T02284
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aqu03009
]
100633563
03012 Translation factors [BR:
aqu03012
]
100633563
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100633563
5.6.2.5 RNA 5'-3' helicase
100633563
Ribosome biogenesis [BR:
aqu03009
]
Eukaryotic type
Other ribosome biogenesis factors
100633563
Translation factors [BR:
aqu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100633563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
Viral_helicase1
ResIII
DEAD
AAA_22
Flavi_DEAD
UvrD-helicase
ATPase
SLFN-g3_helicase
AAA_16
AAA
nSTAND3
UvrD_C_2
Lipase_C
Transp_Tc5_C
Motif
Other DBs
NCBI-GeneID:
100633563
NCBI-ProteinID:
XP_003388772
UniProt:
A0A1X7U8F4
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MEDFVEKHLELIEQERQEEVAQGLSLLSTDLKNIKELETKGVCLSKLGIESERIGLFGRH
IVTFSHRLGRHKLPTHSITCGDIVGIFSKGQSLLPGQLVSGVVVKSSDVHLGVAFEELPE
EVSLGGLGDCLQVVKLANDITYKRMKRALNDLKSMDPILSSHLVDVLFQATPPGPSHSKW
TYQLDQLQTQFDSSDFKFFNQSLDSSQKRAVFFALSRPDVAIIHGPPGTGKTTTVIEYIL
QETLTLNNKVLAVAPSNIAVDNLVERLAASSPKLKIIRLGHPARLVQSVLQYSLDSILAS
TDGSDIVLDVRKEMSSAWSKAGNAKSSSERRKWHTEAKTLKKELIEREEKLVQQILSGAN
VILATNTGATPTGPLKHLPIDHFDVVVIDECAQSLEASCWIPLSRAPKCILAGDHKQLPP
TILSDKAARDGLAVTLMERLVSVYRDQVTTLLTTQYRMNHNIMKWPSQYLYEDSLTAHES
VSHHLLKDLPTVTITTATTIPLLFIDTASCGLYELDTPSEESKGNEGEAEIVLAHVKELI
GAGVREGDIAIIAPYHLQVGMIRERLEANGISTGKVEVHTVDGFQGREKEAVIISFTRSN
KKGEFGFLKEQRRTNVAVTRARRHLAMVGDSETISREPFIKGLLEYCTNNGEVYSAHEYI
DTASMIQAESVATDQQEGFAIKPVEEIKKKDPPSPAVDSNKLAQQRLSYEKQLKEFKKSS
EEQSSITFPNTLSSSQRKIIHELSEELGLSHVSHGEGNDRYIVVSRSRKTNGAECSDSTT
EDDKIQQPLMIKAPQIEDTVCCIDEETISIDVTEKKNLSKVASLPPPSEAKTKIDVKSKA
KDEVIVGATVGVWQCQICGIHLPKENSELHQLRCEREKRRVEDIVKKKKQESELKSKGSQ
KKTKSEKAKPVEQLDDLDLLLEEMKKADKTCNFSGCKKSVNHLGIICPFCKKKYCMTHNI
AETHGCEERARRMARKDLEKELRGDGKGTTAGRKSDSSKRAHLQRKLDKKINDLSADRQR
KKPSS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggaggactttgtagagaaacatttagaactgattgagcaagaacgacaagaagaagtg
gcccagggactctctcttctttccactgatttgaaaaatatcaaagagttggagactaaa
ggagtctgtctctcaaagcttgggattgagtctgagagaattggtttgtttggccgccat
attgtcaccttctctcatcgtttagggagacataaactccctactcattctataacatgc
ggtgacattgtgggtatctttagcaagggccagagtctgttgccagggcaacttgtatct
ggtgtagttgtgaagtcctcggatgttcatttgggcgtggcttttgaggaactacctgaa
gaagtatccctgggtggtcttggtgactgtctgcaagtagtaaaactcgcaaatgacata
acttataaaagaatgaagagagctcttaatgatctcaagtcaatggaccccatcctttcc
tctcatttggtagacgtactctttcaagccacacctcctggcccctctcattccaaatgg
acctatcagctggatcaattacaaactcaatttgactcgagcgatttcaaattcttcaat
cagtcgctggacagcagccaaaagagagcagtcttttttgcattgtccagacccgatgtt
gccattattcacggaccccctggaactggtaagacaactacagtcattgagtacatactc
caggaaactcttacactaaataataaagtattggctgttgcaccctctaacattgcagtt
gataatcttgtcgaaagattagcagcatcttctccaaagttaaagattattaggctcggt
cacccggcaagactagttcaatcagtactccagtattcacttgatagtatcctagcatct
actgatggatctgacattgttcttgatgtaaggaaagaaatgagctctgcttggagtaaa
gccgggaatgctaagtcatcgtctgagaggcgtaaatggcatactgaagctaaaactttg
aagaaggagctgatagagagagaagaaaaactggttcaacagatcttgagcggagctaat
gtcatactggccacaaatactggagcaacgcccaccggccctttgaagcacttacctatt
gatcattttgatgtggttgtcattgatgaatgtgcacaatcattagaagctagctgttgg
ataccattatcaagagctcctaagtgcattcttgctggtgaccataaacagctcccaccc
accattctctctgacaaagctgctcgtgatggtctagctgtaacactaatggagagatta
gtatcagtctacagagatcaagtaacaacactcctgacaacacaatacaggatgaatcac
aatattatgaagtggccctcgcagtatttgtatgaggatagcctcacggcacacgaaagt
gtctcacatcatttattaaaagatcttccaaccgttaccatcaccacagctacgactatt
cctcttctctttattgatactgccagttgtggcttgtacgagttagacacgccctctgaa
gagtccaaagggaacgaaggggaggctgagatagtactggctcatgtgaaggagttaata
ggagctggtgtgagagaaggggacattgcaataatagctccatatcatcttcaagttggc
atgataagagagagactagaggctaatggtatatcaactggtaaagttgaagtacacact
gttgatggattccaaggaagggagaaagaggcagtcatcatttctttcacacgctcaaac
aaaaaaggcgagtttggtttcctcaaggagcaacgtcgaactaatgtagccgtcactcgt
gctcggaggcacctggcaatggttggagactctgagactatctctcgtgaacctttcatt
aaaggacttttagagtattgtacaaacaatggagaagtatacagtgctcatgagtatata
gacactgcatcaatgattcaagcagaatctgttgctactgatcaacaagaaggttttgca
ataaagccagtggaagaaataaagaaaaaggatcctccatctccagcagttgatagtaat
aaattagctcagcagagattatcatacgaaaagcaactaaaagaatttaaaaagagcagt
gaagagcaatcaagcataacattccctaatacattgtcttcctcacagcgtaaaataatt
catgaactatcagaggagctaggcctatcacatgtaagccatggcgaaggtaatgataga
tatatcgtagtcagcagatccaggaaaactaatggagctgaatgcagtgattctacaact
gaagatgataaaatacaacagcctctgatgattaaagcaccacaaattgaagacacagtc
tgctgcattgatgaagaaactattagtattgatgtgacagagaaaaagaatttgtctaaa
gttgcttctcttccacctccaagtgaagcaaaaactaagattgatgttaaaagtaaagca
aaagatgaagtgattgtaggagctacagttggtgtgtggcagtgccagatctgtggcata
catttacccaaagaaaacagtgaactacaccagcttcgatgtgagagagaaaagaggaga
gtggaggacattgtgaaaaagaagaagcaagagtctgaactgaaaagcaaaggctctcaa
aagaaaactaaatcagaaaaagcaaagccagttgagcaacttgatgatctggatctttta
cttgaagaaatgaagaaagcagataaaacttgtaatttctccggctgcaagaaaagtgtc
aatcaccttggaatcatttgccctttctgcaagaagaaatactgcatgacacacaacatt
gcagagacacatggatgtgaggaaagagcaagaagaatggcaagaaaggacctagagaag
gaactgagaggagatggaaagggaactactgcaggaaggaagagtgactcttcaaaacgt
gctcacttgcaaagaaaattagacaaaaagatcaacgacttgtctgctgatagacaaaga
aagaaaccatcatcatga
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