Amphimedon queenslandica (sponge): 100633792
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Entry
100633792 CDS
T02284
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03030
DNA replication
aqu03410
Base excision repair
aqu03420
Nucleotide excision repair
aqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100633792
03410 Base excision repair
100633792
03420 Nucleotide excision repair
100633792
03430 Mismatch repair
100633792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqu03032
]
100633792
03036 Chromosome and associated proteins [BR:
aqu03036
]
100633792
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100633792
DNA replication proteins [BR:
aqu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100633792
DNA Replication Termination Factors
ELG1-RFC complex
100633792
Chromosome and associated proteins [BR:
aqu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100633792
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100633792
Check point factors
HRAD17(Rad24)-RFC complex
100633792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_16
AAA_assoc_2
Rad17
AAA_11
AAA_22
bpMoxR
SLFN-g3_helicase
DNAX_ATPase_lid
AAA_30
AAA_14
RuvB_N
Mg_chelatase
DUF815
AAA_24
AAA_5
Viral_helicase1
AAA_19
ATPase_2
MCM
AAA_7
AAA_28
RFC_C
AAA_23
IstB_IS21
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
100633792
NCBI-ProteinID:
XP_003383239
UniProt:
A0A1X7VPB9
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MDAFFQPGGRAKSKGADKNVGGSKNSAQQGPVEKRKVPWVEKYRPKVVDDVVHQDEVVSV
LKKTLTGSDFPNLLFYGPPGTGKTSAILAIAHELFGRDLYKSRILELNASDDRGIQVIRD
KVKSFARHSASASRPDGKPCPSFKIVILDEADSMTQAAQAALRRTMEKESTSTRFCLICN
YISRIIEPLTSRCSKFRFKPLSSAILRTRLEYICREENVKCNEKAIDRIIETSDGDMRKA
ITFLQSGYRLKGDEEVTEKDIMEIAGVVPQSLIEGLLKTCSSNSYDQLETAVKNFVAEGF
PAVQIMNQLNDVIITHCELNDLQKSAICEQMAVVDRRLSDGADEYLQLLDISSFIMTQFC
QAT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggatgctttcttccagcctggagggcgagccaaaagtaaaggagcagacaagaacgta
ggaggaagtaagaactcggctcagcaaggtcccgtcgagaagaggaaagtcccctgggta
gagaaatatcgtcccaaagttgttgacgatgttgtgcatcaggatgaagtcgtgagtgta
ttgaaaaagacattaactgggtctgattttccaaatcttctcttttacggcccacctggt
actgggaaaacgtcagccattttagcaatagcccacgaactctttggtagagatttgtat
aaatcacgtatactggaattaaatgcatcagatgatagaggaatacaggttatcagagat
aaagtaaagtctttcgcccgacactccgcctctgccagtcgaccagacggtaaaccatgt
cccagtttcaagatagtcatactggacgaggcagactccatgacgcaagcggctcaagct
gctttaagaaggacaatggaaaaggagtccacttcaacaagattctgtctcatttgtaat
tacatcagtcgtatcattgagccactgacctcacgttgctcaaagtttcgcttcaaacct
ctctcctcggccattttacgaaccagactggaatatatctgtagagaagagaatgtgaaa
tgtaatgagaaggccatagataggataatagaaacatctgatggagatatgagaaaggct
ataacatttcttcaaagtggctacagacttaaaggagacgaggaagtcactgaaaaggac
ataatggaaattgcaggagtagtgccacaatcactcattgaaggattactcaagacctgc
tcgtcaaactcgtacgatcaactggaaactgcagtaaagaattttgtcgcagaaggtttt
ccagctgtacagattatgaatcaattgaatgatgtcattattactcattgtgaattgaac
gacttacaaaagtcagcaatatgtgaacagatggcggttgtggataggagattatctgat
ggagcagacgaatatctccagctccttgacatttccagtttcataatgacacaattctgt
caagcaacttaa
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integrated database retrieval system
