KEGG   Amphimedon queenslandica (sponge): 100633956
Entry
100633956         CDS       T02284                                 
Name
(RefSeq) spliceosome RNA helicase DDX39B homolog
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03013  Nucleocytoplasmic transport
aqu03015  mRNA surveillance pathway
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100633956
  09122 Translation
   03013 Nucleocytoplasmic transport
    100633956
   03015 mRNA surveillance pathway
    100633956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqu03019]
    100633956
   03041 Spliceosome [BR:aqu03041]
    100633956
Enzymes [BR:aqu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100633956
Messenger RNA biogenesis [BR:aqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100633956
Spliceosome [BR:aqu03041]
 Complex C
  Other components
   EJC/TREX
    100633956
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100633956
SSDB
Motif
Pfam: RNA_pol_I_A49 Helicase_C
Other DBs
NCBI-GeneID: 100633956
NCBI-ProteinID: XP_019860683
UniProt: A0AAN0JUV2
LinkDB
Position
Unknown
AA seq 237 aa
MKRRTLVTKTDHMTYIGTNYETEGTMNTFPFRKYMIGVLDKETGTMELHNTDIFHMTPYI
KGKTDTPVTDPNPSKRKSISKEEYSEGLEKVMMSYSSSRAKKAWSAAKRNHIDSLRLEET
LAPTVSHIETEMDKTMNELGMAFKGFSKRILVATDLFGRGMDIERVNIVFNYDMPEDSDT
YLHRVARAGRFGTKGLAITFVSEKTDAQVLNSVQDRFEVNITELPDEIDVNSYIEQL
NT seq 714 nt   +upstreamnt  +downstreamnt
atgaagaggaggacattggttacaaagacggaccacatgacgtacattggtaccaattac
gagactgagggaaccatgaacaccttcccttttagaaagtatatgattggtgttcttgat
aaagagactggtactatggagttacataatactgatatatttcatatgacaccttatatc
aaaggtaaaactgatactccagtgactgatcctaatccctccaagcgtaagtccatatcc
aaggaagagtattctgagggtcttgagaaagtgatgatgtcatacagtagctctcgggca
aagaaggcgtggtcagcagctaagaggaatcatatagactcactgagattggaggagaca
ctagcaccaactgtgagtcatattgagactgaaatggataagactatgaacgaactaggt
atggcattcaaagggttcagtaagcgtattctggtagctactgatctgtttggtcgtggg
atggatattgaaagagtcaacattgtctttaattatgatatgcctgaggacagtgatacc
tacctccacagagttgctagggctggtagatttggaaccaaaggccttgccatcacattt
gtctctgagaaaactgatgctcaagttcttaattccgttcaagatcgttttgaagtcaac
atcactgagttgcctgatgagattgatgtcaacagttacattgagcagctctga

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