Amphimedon queenslandica (sponge): 100634054
Help
Entry
100634054 CDS
T02284
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aqu04131
]
100634054
Membrane trafficking [BR:
aqu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
100634054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
100634054
NCBI-ProteinID:
XP_019849669
UniProt:
A0A1X7VCT3
LinkDB
All DBs
Position
Unknown
AA seq
1492 aa
AA seq
DB search
MYYPVGWPLVLDGRGGTGGAPLQLLTARNRTKNLIFELREHSIAVWHSRLHILLSSYKLS
PGNIKRHGVNSCAVLKPDGSCLAISTSNGLLYFLHIIYNPNSSGGRYAYKEHGLSRNNPS
FDLPSEGPPLEQVSLNLIHEVMVSGLTSVMCSFVGQLMVCSDLGIIHRVSWSGVFDANLS
IYLSSLPFSNDLYPESRAQPLGELQSVVDISCSNELHGFAIVLSNGKTAFVTGKSAKFEP
KSLQGVWLKETTDATCVAINPRYNLIVCGRANGLIDTYTLDDASGAWNKLNTLQLSKLHF
ADSDQYQLGAVQCLQWSPIDYSVLAVAWKNGGLSMWSVFGSLLFHSLGNQPGTPTPLFRS
QSTLLQSLVWSIDTYQLWLLPRGEQLFDQYKAHLVHSTPAAEGGEDSTDTTSDNKVLIAG
SHLVVINFVKSAFINNPVITNHQQLFLHSSDRLYLSPPLSPPPSNLRAGYYSNGSNELTK
MEGVPLWKIIQVPPSYLLLNWPLQYAAISPKGDYVAVAGKAGLAVYLIQKRKWKLFGSEL
QEQSMVCRGGLCWFDDVIVFPCRVNGTDDEVRFFSVHRNLDTSTCLHILRLVSSPVRLNV
LGPHLLIATRDLSLTLYNMSISYDTDKLVPSLSIVKLHVMSFVSFVTRPWVLGLVSIVPS
TIRAEPVAGGDDMNRLNSVLLNISGRVVMIQREKPTTDTESMDDEIQWSFSNPVSLAPSV
EAIWTPPIDQTHMTSPNHMMESLWVACGAQGIKVWLPLYPRGETHPTFLSKRIMLTLPSS
SSFPQTILFSEAIIVGVSHEPLHADHSLTTPLYFPPTNVRRITRLFLNHILRQLLKRNLG
SHALQIARTHAHLSYFAHILELMLHEILEEEAPGSIPIPDALLPRVIEFIKEFPHFFETV
GSCARKTEVALWNYLFAAVGNPKDLFEVCLVDSRLKTAASYLIIIQNLEPPAVSRHLATR
LLDASLDNNQWELAKDLVRFLKRIGPGDLSPLSPVSSLPTPSTPYGAKPLKPSGPSSLGA
NALSSPVSNLPDLDQSVVMVTRDHLSSGNPSGVVSISGDYCDSSGKIIKRPHFALDVDTK
EDFFIELILCRHARKLLTTASLSDLGLFAAHLEFDIPQWMAKERHRAACIDSYVQVLCDL
HKQFHWPFPPSSTLTTPSSIATPSGLGSNTRYYPVVSDPKQIRVTPDREDNPDSSLESSS
RLGLKRSNRPPDLNIPGTNGKVEVVAVNEEGKGEAEMEQQLIQEVIFQSSTPSKVSGGTG
SSENFIKPTSSDKVCDSESIVETVDDDPSLWEEDVSLTTVWTTSTRTVQSEREIRYFVDA
SIQSYCIEWAAVLGILLQDSTVFIHMQQLLEDEERIEGVVFPSGIDSRIMTGVSSLSEWA
ASNCPGYLPFLSLITPILCQWQQSLVDHMKKTPGEAQLQAGTGVGSDPLDLLVNHESTGG
SAGVEGGGEPTSPSETNKKILKQNNSNKTDTPSQETAHQQQKQDETGGCVIN
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgtattatcctgtaggttggcctttggttcttgatggtcgtggagggactggtggggct
ccattacaactcctgacggccaggaacaggacaaagaaccttatctttgagctgagggag
cactcaattgctgtctggcactctaggttgcatattctactgagctcatacaaactatct
cccggtaatatcaagagacatggagttaattcttgtgctgttcttaaacccgacggatcc
tgcctagccatttcaacttcaaacggtttattgtatttccttcacataatctacaatccg
aatagctcgggaggccgttatgcgtacaaggaacacggactttctcgtaataatcccagt
tttgatttaccctccgaaggccctcctttggagcaagtctcgttgaacctgattcacgag
gtcatggtatccggtttgactagcgtcatgtgttcgtttgttgggcagctgatggtttgt
agtgaccttggtataattcatcgtgttagttggagtggtgtctttgatgctaatctctca
atatacttgagttcattacctttttctaatgacctgtatccagagtctagagcccagccg
ttaggggagctgcagtcagtagttgatatatcttgttccaacgagttgcatggttttgct
atagttttatcaaatgggaagacggcatttgtgactgggaaatcggctaaatttgagcca
aaatcacttcaaggagtttggctaaaggagactactgatgctacctgtgttgccatcaat
cctcgttataatctgattgtgtgtgggcgtgccaatggtttgattgatacgtatacactt
gatgatgcctcaggagcatggaacaaattgaacacacttcagctctcaaagcttcacttt
gctgactcagatcagtatcagttaggggcagtacagtgccttcaatggagtcctatcgat
tacagtgtgttggctgtggcttggaagaatggcggtttgtcaatgtggtctgtctttgga
tctcttttattccattctcttggcaatcagccaggtacacctactccattatttcggtca
caatcaacattattacaatcattagtctggtcgatagatacttatcagttatggttgctg
ccacgcggtgagcagctctttgaccagtacaaagctcaccttgtccactccactccagct
gctgaaggaggagaggattccactgataccacctcagataataaagtcctcattgccggg
agtcacttagtcgtcattaactttgtaaagagtgcctttatcaataaccctgtcataacc
aatcaccagcagctcttccttcactcgtccgatcgactctacctctctcctcctctctcc
ccaccccctagtaaccttagggctggttactatagcaacgggagcaacgagctcactaag
atggaaggagttcccctatggaagattattcaagttccaccaagttatttgttgcttaat
tggccattacagtatgcagccattagtccaaaaggggattatgtagcagttgccggtaaa
gctggccttgctgtgtatttgatacagaaaaggaaatggaagctgtttggcagtgagctc
caggagcagagtatggtctgtagaggaggattgtgttggtttgatgacgtcattgtgttt
ccgtgtcgtgtcaatggaactgatgatgaggttcggttcttttctgtgcacagaaatctc
gacacgtcaacttgtcttcatattttgcgtcttgtatcatctccagtgagactcaatgtg
ctggggccacacctacttatagcaactagggatctatcactgacgctctataatatgagc
atctcttatgacacagataaattagttccttctttgtcgatcgttaaattacatgtgatg
tcgtttgtctccttcgtaactcgtccctgggttctaggtcttgtatcaatagtaccttca
acaatacgagcagagcctgtcgctggtggtgatgacatgaacaggttgaatagtgtatta
cttaacataagtggacgtgttgtgatgatacagagagagaaacctaccactgatactgaa
tctatggacgatgagatccaatggtcgttctctaatccggtcagtcttgctccttcagtt
gaggctatttggactccgcctattgaccaaacccacatgacgtcaccaaatcacatgatg
gagtctctttgggtggcatgtggagctcagggaattaaagtgtggcttccactgtatccc
cgtggggagacccatcccacgttcctgtccaagaggataatgctaactcttccctcctcc
tcctctttccctcagaccattctcttctccgaagcaataatcgtgggcgtgtcacacgaa
cctcttcacgccgaccattcgctgaccacacccctttacttcccacctactaatgttaga
agaattactcgtttgtttttgaatcacattctaagacaattattaaaaagaaatttaggt
agccatgccctccaaatagctcggactcatgctcatttgtcttatttcgctcatatactt
gagctgatgcttcacgagatattggaggaggaggcaccaggttctattcccataccagac
gcattattaccaagagttattgagttcattaaggagtttcctcatttctttgagacggtt
ggttcttgtgctaggaagactgaggtagctctgtggaactacctctttgcagccgtgggt
aaccccaaggacctgttcgaagtttgtttggttgattcaagactcaaaactgctgcctct
tatctcataataattcaaaacctcgagccacctgctgtcagcagacatttagctacacgt
ctccttgatgcatctcttgataacaatcagtgggaactagccaaagatcttgttagattc
cttaaaagaatagggcctggtgacctctcccctctctctcctgtgtcttctcttccaaca
ccatcaaccccgtacggtgctaagccgttgaaaccctcaggtccgagttctctcggagct
aatgctctctcgtctcccgtttctaaccttcctgaccttgatcaatctgttgttatggta
acgcgggatcaccttagcagcggtaacccatcaggcgtggttagcatcagtggagactat
tgcgactcatcgggaaaaattataaagaggcctcattttgcattggatgttgacactaaa
gaggatttctttatagaactcattctctgtcgtcacgctcgcaagctactaacaacagcc
tcactctcagaccttgggctctttgccgctcacttagaattcgatataccacaatggatg
gccaaagaaaggcatagagctgcctgcattgatagctatgttcaggttctgtgtgacctc
cacaagcagtttcattggccgtttcctccctcctctaccctgaccacgccctctagtatt
gccacgcccagtggactgggcagcaacacgagatactatcctgtcgtatcggaccccaag
cagattagagtaactcctgatagagaggataatcctgacagctcgcttgaaagttcttct
agattgggtctgaagagatccaacagaccccctgatctgaatattccaggaaccaatggg
aaggtagaggtggtagcagtcaatgaagaaggaaaaggagaagctgaaatggagcaacag
ttaatccaagaggtcatctttcagagctcaactccttccaaagtctctggaggtactggt
agctcagagaattttatcaagcctacatcatctgacaaagtttgcgactctgaatcaatc
gtagaaactgtagacgatgacccaagcctatgggaggaggacgtttcattgacaacagtg
tggactacgtcgacaagaactgttcaatcagagagagagatacgatactttgttgatgct
agcattcagtcttattgcattgaatgggcagcagtattagggatattgctccaggactct
accgtgtttattcacatgcagcagctactggaggatgaagagaggattgagggggttgtg
ttcccatccggtattgacagtaggataatgactggtgtgtcatcacttagtgaatgggca
gctagcaattgccctgggtacctgcctttcctatcactcatcactccaatcctttgccaa
tggcagcaatcattagtagatcatatgaaaaagacacctggtgaagcacagctacaagct
ggaacaggagttggcagtgatcctcttgatttgctagtgaatcatgaatctactggtggg
agtgctggagtagaaggaggaggagaacctacttcaccatcagagacaaataaaaagata
ttgaagcaaaataacagcaacaaaactgatacaccttctcaagaaactgcacatcaacag
cagaaacaggacgagacaggaggctgtgttataaactga
DBGET
integrated database retrieval system
