Amphimedon queenslandica (sponge): 100634218
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Entry
100634218 CDS
T02284
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100634218
09123 Folding, sorting and degradation
03018 RNA degradation
100634218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100634218
03041 Spliceosome [BR:
aqu03041
]
100634218
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100634218
mRNA degradation factors
5'-3' decay
Lsm complex
100634218
Spliceosome [BR:
aqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100634218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100634218
NCBI-ProteinID:
XP_019852863
UniProt:
A0AAN0J838
LinkDB
All DBs
Position
Unknown
AA seq
108 aa
AA seq
DB search
MAASAPPDKKRRETLLSAELGKYLDKRIRVKFQGGRETSGILKGYDQLLNLVLDGAIEYL
QDPKDQFKLTDETRSLGLVVCRGTAVVLICPADTMEPIANPFLQQEPS
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatcggcacctcctgataagaaaaggcgagagaccctcttgagtgcagaacta
ggcaaataccttgacaagagaattagagttaaattccaaggaggaagagaaactagtggc
atattgaaaggctacgatcaactcctcaaccttgtactggatggtgctattgaatacttg
caagacccaaaggatcaatttaagttgacagacgagactcgttctcttggtctcgtggtc
tgccgtggaacagctgtggtgctaatatgtccagcagacactatggagcctattgctaat
ccattcttacaacaagagccatcttaa
DBGET
integrated database retrieval system
