Amphimedon queenslandica (sponge): 100634225
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Entry
100634225 CDS
T02284
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03030
DNA replication
aqu03410
Base excision repair
aqu03420
Nucleotide excision repair
aqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100634225
03410 Base excision repair
100634225
03420 Nucleotide excision repair
100634225
03430 Mismatch repair
100634225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqu03032
]
100634225
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100634225
DNA replication proteins [BR:
aqu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100634225
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100634225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_7
RNA_helicase
AAA_22
PTCB-BRCT
RuvB_N
AAA_5
nSTAND3
Rad17
AAA_14
NTPase_1
RCF1-5-like_lid
TIP49
BRCT_2
AAA_33
AAA_19
AAA_16
AAA_30
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
100634225
NCBI-ProteinID:
XP_019849550
UniProt:
A0AAN0IXQ4
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MDIRGFFKAKIKEKAAIKEDEDDFKSVKRRRTGDKRKKPRPRILSDSDDEEKKETKRVKT
TPPAAKEVELRRSTRITPLKEKHGHLKKPNKATPIKTKNRKEISSAEEFFGSAPVATPTS
NKKSTKKEEPKETRPQDIAAEKPAKGKRKIQYIDIEEEPPAQKLKLLRDKDQKDLSTDKG
HVSESPPLPPPAHIDLTSSCESVKQEPKTIKQEPKKVKQEPKKVKQEPKQVKQESKPVKQ
DSKPVSDVKPTASSEPAKRQKSSTPPAKSVKPVTEAETALKTPAAKRYDSYREYMNRGGP
KAPGSKEIPQGAPNCLYGLTFVFTGVGESMEREEAADIVKSYGGRVTTSLSKKTNYLVVG
EGAGVSKLSQAKSLNVCEIDEDGFLELIRTRPERKGVVTTPTNTGVKSRKRKGSSNEPIP
VTTPPPATKRPCYSVMTPTSTLTTPTTPTTPTDLSSIPTSSFYPTTPTSTKSAKPKGPST
LLWVDKYAPASVKGIIGQQGGKSNANKLLEWLKVWHKYHGVSASTRKLTGEGVFHKAALL
SGPPGIGKTTTAVLVCKELDYTFTELNASATRSRKSLQQFVTDSLSSHSMDSYITGGSQR
HHVLIMDEVDGMAGNEDRGGVMELIQLIKTSRVPIICICNDRSQAKMRSLANYCFDLRFY
KPKLEQIKGPMMSVAFKEGIKIKPEALNEIIISCNYDIRQVLHSLSMLAAGTTSITKESL
GGGEGKTSIRKSPFDVVRKVFQPFDGQRELSLREKSDLFFTDYSLMPLFVQENYLQVKPV
NNTGTATLSKIQLLEKVSSAADSIAQGDLVSRIVRSDQGWQLLPTQAIFSSILPGEYMRG
GMSLPEFPQWLGNYSKTSKTDRILQQLVSHSTLNCSCNKTEFLLDYSPLLSAALTAPLQN
NGDKEGPSRVVETLKDYDLTREDWEDVIELNSYSGRASALSTIDPKVKATLTRLYNKEDI
KLPYSVMTVRTKRGRASLEEEEEEEREGEEAASSSGDEGDLSSLGVKAVKTDKRSSTASS
SKRRKISSNKKKQK
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagaggattctttaaagcaaaaattaaagagaaagccgccattaaggaagat
gaagacgattttaagagcgtaaagagaaggagaactggagataaaaggaagaagcctcgt
ccccgtattttaagtgattctgacgacgaggaaaaaaaggagacaaagcgtgtcaagacc
acacctcctgctgcaaaagaggtagagctaaggagatctacgaggattacacctttgaaa
gaaaaacatggccatttaaaaaaacctaataaagccacacccattaagacgaagaatagg
aaagagatttcatcagctgaggaattctttggttctgctcctgtagccacacccactagc
aataagaaaagtacaaaaaaagaagagcctaaagagacacgcccacaagatatagcagct
gaaaaaccagcaaaaggaaagagaaaaatacaatatattgatattgaagaagaaccacct
gctcaaaagcttaagttgttacgtgataaagatcaaaaggatttgtcgactgataaagga
cacgtctcagaatcaccccctctccctcctccggcacatattgatcttacttcatcatgt
gaatcagtcaaacaggaacctaaaacaatcaaacaggagcctaaaaaagtcaaacaggag
cctaaaaaagtcaaacaggaacctaaacaagtcaaacaggaatcgaagcctgtcaaacaa
gatagtaaaccagtttcagatgtaaaacctactgcatcaagtgagccagcgaaaaggcag
aaatcgagtacaccacctgcaaaatctgtcaagcctgttactgaggctgagactgcttta
aagactccagccgctaaaaggtacgacagctatcgtgagtacatgaacagaggcgggcct
aaagcacctggatctaaggaaataccacaaggcgcccctaattgcttgtatggtcttacg
tttgtgttcactggcgtgggagagtcaatggagagggaggaagcagctgacatagttaag
agttatggtggtcgtgttacaactagtttgagcaagaagactaattacctggtggttggt
gagggggcgggagtcagtaaactatcacaggctaaatctttgaacgtttgcgagattgat
gaagatggtttcttagagcttataaggactcgtcctgagagaaagggtgtggtcaccacg
cccacaaacacaggtgtaaagtctcgtaaaaggaagggtagctctaatgaacccataccc
gtgaccacaccccctcctgccactaaaagaccatgttattcagttatgacacctacttca
acattaaccacacccacaaccccaaccacacccactgatctaagctctattcctacttca
tcattttatccaaccacacccacttcaacgaaatctgcaaaaccgaaaggaccctcaacg
ttattgtgggttgataaatacgccccagctagtgtcaagggtatcattggacagcaaggt
ggaaagagcaatgctaacaaactcttagagtggctgaaagtttggcacaagtatcatgga
gtgtcggcaagcactaggaaactaactggagaaggtgtgtttcataaagcagctctatta
tccggcccacctggaatagggaagactaccacagctgtacttgtttgtaaagaattagat
tacacattcactgagctaaatgcaagtgccactaggagcaggaagtcactgcaacagttt
gtaaccgactcactgtcctctcactcaatggactcttacattactggcggttctcagaga
caccatgtccttataatggatgaagttgatggtatggctggtaatgaagacaggggagga
gtaatggagttgatacagttgattaagacatcccgtgtccctatcatttgcatctgtaac
gatcgtagtcaagcgaaaatgagatctctagcaaattattgctttgatttgagattttat
aaaccgaaactcgaacagattaaaggtccgatgatgtctgtggctttcaaggaaggcata
aagataaagccggaagcactgaatgagatcataatatcttgcaattatgatattaggcag
gtattacatagtctgtcgatgttagctgctggcactactagtatcactaaagagtctctc
ggaggaggagaaggaaagacctccattaggaagagcccctttgacgtggttcgaaaggtc
ttccaaccttttgacgggcagagggagctatcgctgagggagaaatctgatttatttttt
accgattattctttaatgccactttttgtacaagagaattatcttcaagtcaagccggtt
aacaatactgggactgctacactttcaaagatccagttattagagaaggttagttcagct
gctgattccatagctcaaggtgatcttgtgtcaagaatagtccgctcagatcaaggctgg
cagctcctccctacacaagcgatattctccagtatcttacctggcgagtacatgcgtggt
ggtatgagcctaccagagttccctcagtggttgggtaactattcaaagacttcgaaaacc
gatagaatattgcagcagctggttagtcattccacgttgaattgttcctgcaataagaca
gaattccttcttgattactctccgctattgagtgctgcacttactgctcctcttcaaaac
aacggtgacaaggaaggtccctcaagagttgtagagacactgaaagattatgatttaacg
agagaggactgggaagatgtgatagagttgaatagttactcaggaagagcctcagcatta
tctaccattgacccaaaggtaaaagcaacattgacaagactgtacaataaggaagacatc
aaactgccatacagtgtcatgactgttcgtacgaagagaggaagagcttcactggaagag
gaggaggaggaggagagagagggagaagaggctgccagcagcagtggagatgaaggggac
ttgtcgtcattgggtgtcaaagctgttaaaactgataaaagatcatccactgctagcagc
agtaagaggaggaaaataagtagtaacaagaaaaaacagaagtga
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