KEGG T02284: 100634388

Amphimedon queenslandica (sponge): 100634388

Entry

100634388         CDS       T02284

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like

K03011

DNA-directed RNA polymerase II subunit RPB3

Organism

aqu Amphimedon queenslandica (sponge)

Pathway

aqu03020

RNA polymerase

aqu03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:aqu00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100634388
  09124 Replication and repair
   03420 Nucleotide excision repair
    100634388
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aqu03021]
    100634388
   03400 DNA repair and recombination proteins [BR:aqu03400]
    100634388
Transcription machinery [BR:aqu03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     100634388
DNA repair and recombination proteins [BR:aqu03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100634388

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_L

Other DBs

NCBI-GeneID:

100634388

NCBI-ProteinID:

XP_003384595

UniProt:

A0A1X7VEI4

LinkDB

Position

Unknown

AA seq 274 aa
MPYAKNPLVKVSEITDENVKFIIERTDLSMANALRRIFIAEVPTLAIDWIHLIANSTVLH
DEFIAHRIGLVPLTSDGTVDKMQYSRECTCNDFCPMCAIEYTLDVKCNDESTRAVTTRDL
LSSNQSVIPVTSMVRESDTSDYGLTDDILIVKLRKGQELKLKAYATKGFGKEHAKWSPAA
GISFEYDPDNALRHTTYPKPEEWPKSEYSEIDESQPEAPFDFKSKPSKFFFNVESSGSLR
AETIIMSGLNVLKQKLSDLQIQLQQQTAEEALAI

NT seq 825 nt +upstreamnt +downstreamnt
atgccttatgccaaaaatcctttggtaaaagtttctgaaataactgacgagaatgtcaaa
ttcatcatcgaaagaactgacctgagtatggccaatgcattaagacgaatatttattgca
gaagttccaacattagctattgattggattcatttaattgctaattcaactgttcttcat
gatgagtttattgctcaccgaattggactggtaccacttactagtgatggaacagtcgat
aaaatgcagtattcaagagaatgtacttgtaatgatttttgtccaatgtgtgccatagag
tatacacttgatgtaaagtgtaatgatgaaagcactagagctgttaccacacgtgacctt
ttgtcttcaaatcaatcagttataccagtaacttcaatggttagagaaagtgacacatca
gattatggcttaactgatgatattttaatagttaaacttaggaaagggcaagaattgaaa
ctgaaagcttatgcaacaaaaggatttggtaaagaacatgctaaatggagcccagcagct
ggtatatcatttgaatatgatcctgataacgcattaagacacactacttatcctaaacca
gaggaatggcctaagagtgaatacagtgaaattgatgaatctcaaccagaagctcctttt
gacttcaagagtaaaccaagcaaatttttcttcaatgttgaatcatctggatcgttacga
gcagagaccattatcatgtcaggattgaatgtactcaagcaaaagttaagtgatctacaa
attcaattgcagcaacaaactgctgaagaagcacttgctatatga

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