Amphimedon queenslandica (sponge): 100634515
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Entry
100634515 CDS
T02284
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100634515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100634515
Spliceosome [BR:
aqu03041
]
Complex B
Other components
Prp19-related factors
100634515
Complex C
100634515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Nup35_RRM_2
zf_CCCH_4
Torus
zf-CCCH_2
RRM_occluded
RRM_YTH1
RRM_3
zf-CCCH
RRM_PARP14_3
zf-CCCH_4
zf-CCCH_3
zf-CCCH_PARP12
zf-CCCH_10
FYVE
RRM_7
zf-CCCH_12
Motif
Other DBs
NCBI-GeneID:
100634515
NCBI-ProteinID:
XP_003384752
UniProt:
A0A1X7VDA5
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MALSKSANTYNRLNWEQSEFPILCQTCLGDNPYLRMLKDSYGDECKICNRPFTVFRWCPG
ARMRYKRTEICQVCAQLKNVCQTCLLDLEYGLPVQVRDHALKVKDDLPKSDVNKEYYIQN
IQKEIANTGNTEPGGAVGKAQAPSDLLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEMPSDPSDPLSLQNIKDRYYGTNDPVAEKLLGQAKELPQLSPPEDKSITSLYIGGLS
DDISERDLRDHFYQFGEIEDINVIHKQNCAFITFTTRPAAEKAVEQTFSKLIIKGNRLKV
LWGRSQSGMIGGGGANKRSLTGPVPGLPDELPPPVNDTFDPLNLKSTGGNYQLAPPPPPP
GAPPQAPGYYGSQRSQSGWIPPLPPGPIPPPALYYPSQDPHHLGSRKPRPTN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcactctcgaagtcggccaatacttacaacagattgaactgggagcagtctgaattc
cctattctttgtcaaacctgtttaggagataatccatatttaagaatgttgaaggacagt
tatggcgatgagtgtaagatctgcaatcgcccgtttacagtgtttaggtggtgccctggg
gccagaatgaggtacaagagaacagaaatatgtcaggtttgtgcccaactgaagaatgtt
tgtcaaacgtgtctacttgaccttgagtatggactcccagttcaagtcagagaccatgct
ttgaaggttaaagatgatttgccaaaaagtgacgtcaacaaggaatactacatacaaaat
atacagaaagagattgctaatactggtaatacggaaccaggtggtgctgtagggaaggct
caggctcctagtgacttgttattgaaactagcgagaaccactccttactataagaggaac
agaccacacatctgctcattctgggtcaagggagaatgtaaaagaggagaagaatgtccc
tacagacatgagatgccatcggatccatcagatccattgtccttgcaaaatatcaaggac
aggtattatggaaccaacgatcctgtagcagagaaactccttggacaagctaaagaatta
ccgcaactgagtccaccagaagacaagagtataacctcgctatacattggaggtctgtct
gatgacatcagtgaaagagacctaagggatcatttctatcagtttggtgaaatagaagac
attaatgtcattcataaacaaaattgtgcatttattacatttactactcgtccagcagct
gaaaaagcagttgaacaaactttcagtaaactaataattaaaggtaatagacttaaggta
ttgtggggcagatcacagtccggaatgattggagggggcggagctaacaagcgtagccta
actgggccagtacctggtttacctgatgagttaccaccacctgttaatgacacatttgat
cctctcaatttgaaatcaactggcggtaattaccagttagcacctccccctcctcctcct
ggtgctcccccacaagctcctggttactatggtagccagcggtctcagtcaggttggatt
cccccactccccccggggcccattcctcctcctgctctctattatccatcacaggatcca
caccatcttggatcaaggaaaccgcgcccaactaattaa
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