Amphimedon queenslandica (sponge): 100634726
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Entry
100634726 CDS
T02284
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100634726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqu03021
]
100634726
03036 Chromosome and associated proteins [BR:
aqu03036
]
100634726
Transcription machinery [BR:
aqu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100634726
Coactivators
SAGA/TFTC/STAGA complex
100634726
Chromosome and associated proteins [BR:
aqu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100634726
STAGA complex
100634726
TFTC complex
100634726
SAGA complex
100634726
SLIK complex
100634726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_Nup120_160
Ge1_WD40
Beta-prop_HPS5
WD40_like
DUF7165
Motif
Other DBs
NCBI-GeneID:
100634726
NCBI-ProteinID:
XP_019849552
UniProt:
A0A1X7VE07
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MSSISSGGSGSVRGEKVEEIWQNVQDTLREQRYPSHAHFPVVQSLKDLVNNSVHIETSGD
PLVTAWTAQPGGSKDIQIGFQSFIDYLLHETDSYKTELLNSLVYPLFVHCYVSLVSSNET
ESAKRLYADTSHSIDSHCVSNDELQQLLSLTSAASLQSSPLVEKYRSGKYFVRLSELAFT
MLMSFLQAHPTTALLNIIHKHFSIEVFGCKVSQPTSEQKMEGKKTSNFIKPKIEVLPESD
FSLSSFPRPPIPPPLPPFVPTSTGEEALAAKHDFQSKLTGATQQLEPSIPSLLLCIVQAT
ENTWVQCASLSSWSKEYACGLDDSSVVISSWLPRSTESESVLSLKGHHGPVHGLSYSPNG
QFLLSSSEDTTVRLWNTSSHSPVAIYEGHSYPVWDVSFSSVDGYFTTASYDRTARLWNTD
RVYPLRIFAGHEDSTDVVHFHPNGSYIATGSKDHTSRLWDINTGNCVRLFPGSKSPITVI
AFSPFGKQVATATNGGTITLWDLGMSRIDWEVKAHTRSVTSLAYSCDGTLLASTSEDKTI
KLWNMKAVLVNTANSGSTQGLISTQSTGDLLPLHVKFTHRNSLIVIGVSHNGTASGGAGT
QTNDGGNTNTNNNILSPPDNFFWRSSNHYFYN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaatatcttcaggaggttctggatctgtcagaggagagaaagtcgaggagata
tggcagaatgtacaagatacgctcagagaacaacgctatccaagccacgcccacttccct
gttgtccaatcattgaaggatttagtgaataattccgttcacattgaaaccagtggagac
ccactagtcactgcttggactgctcagcctggaggttccaaagacatacaaattggtttt
caaagtttcattgattatttattacatgagactgattcatacaagacagagctccttaac
tctcttgtgtacccattatttgtacactgctatgtctctctagtatcatctaatgaaaca
gaatcagctaagaggctgtatgctgatacttctcatagcattgattctcattgtgtttca
aatgatgagctgcagcagctgctgtcactcacttcagctgctagtttgcagtcatctcca
ctagtagagaaatacagaagtggaaagtatttcgttcggctctcagagcttgcctttacg
atgctgatgtcatttctccaagctcatccaaccacagctttgctcaacattatacacaag
cactttagcattgaagtctttggatgtaaagttagccaaccaacctccgaacagaaaatg
gaaggaaagaaaacttcaaatttcataaagccaaaaattgaagtcctaccagagtccgat
ttcagtctttctagtttcccacgtcctcccattcctcctcctcttcctccctttgtccct
acctcaactggggaggaggcactagcagcgaaacatgattttcagtccaaactaacggga
gcaacacaacagctggaaccgtcaataccctcactcttactctgtatcgtacaggctact
gagaacacctgggtccagtgtgcttcattatccagttggtctaaagagtatgcttgcgga
ttggatgactcgtccgttgttatctcgtcttggttgccgcggtccactgaatcagagagt
gtattgtcattgaagggccaccatggtccagtgcatgggcttagctattcccctaacggc
cagttcttgttgtcatcatcagaggacactactgtaagactatggaacacttcttctcat
tctcctgttgctatatacgaaggtcactcctaccctgtatgggacgtctcttttagctcg
gtcgacgggtatttcacaactgctagctatgacaggacagcaagactctggaacactgat
agggtttatcctttaagaatattcgcaggacatgaagatagtactgatgtggttcacttt
catccgaatggtagctacatagcaactggttctaaggaccacaccagtaggctatgggac
attaatactgggaattgtgtccgcttgtttcctggcagtaaatctccaatcactgttatc
gccttttctccttttggaaaacaagtggctactgccactaatggtggtactattactctg
tgggatttgggcatgtcaaggattgattgggaagtgaaggctcacacacgaagcgtgaca
tcactagcttatagctgtgatgggacactcctggcatcaaccagtgaagacaagaccatc
aaactgtggaacatgaaagctgttcttgtcaatacagcaaattctggatccactcaaggt
ttgatcagtacccagtccactggtgacctccttcctcttcatgttaaattcactcacagg
aattctctcattgtcattggtgtgtcacacaatggcacagccagtggaggagctgggacc
cagactaatgatggtggaaacactaacactaataacaacattctttctcctcctgataat
tttttctggagatcaagcaatcattatttttacaactag
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integrated database retrieval system
