KEGG   Amphimedon queenslandica (sponge): 100634945
Entry
100634945         CDS       T02284                                 
Name
(RefSeq) THO complex subunit 2-like
  KO
K12879  THO complex subunit 2
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03013  Nucleocytoplasmic transport
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100634945
  09122 Translation
   03013 Nucleocytoplasmic transport
    100634945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqu03019]
    100634945
   03041 Spliceosome [BR:aqu03041]
    100634945
Messenger RNA biogenesis [BR:aqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100634945
Spliceosome [BR:aqu03041]
 Complex C
  Other components
   EJC/TREX
    100634945
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100634945
SSDB
Motif
Pfam: THOC2_N Thoc2 TPR_19
Other DBs
NCBI-GeneID: 100634945
NCBI-ProteinID: XP_019854368
UniProt: A0AAN0JCD9
LinkDB
Position
Unknown
AA seq 725 aa
MEGMQKLVKNWSSKGREEALALFKESFSTFNHDSILSLHRSAESSLYGLFYDLFSCCINN
EIDSDEVGDFCKSLLTSLDSSPILSSLITDVLSSLDAEVSCSEDKSQRKSLRSLTLSLVS
VTGDDLLKERLDMDSLEGAGFISSKNSFNQKYVKTKTKIYYKQQKFNLCREENEGFSKLI
SELGHEPLVGVDHGQVLDSIKSLIGRFSMDPNRVLDVILQAFESHFDQRHFFIPLLRSYP
CSPSTFINILGFKYHTYHLSDSDGQCPPTPPSLYSLTAVLLNEGMINIHGLTPHLRLSME
EFKELHQSIADNANAIYRKANIVTLTDKTDEEKEKEAEAAQKLKEDHKAKLSLEHNQVLG
ICHACLEQGDWPSARSIINQLPPNLAMASPQLVQSLCRLVEYCIEPLYRLHAPRGTTPSP
LSSSFSISRCQSFKDMVPMAMEMIYALGPHLHSDPILLCKIVRLGKAFLKEMFPGSDPSR
TITNEHLENEVLRWFLSIIDGVVLPSLSMLQFNCGMAEEVWSMIRLLPYETRYMLYGYWK
NESYSNHPDLLIVKCDTLNKGKYIMKRLTKDNVKQSGRQLGKLNNSNPGIIFDYVLSQIQ
RYDNFIIPVVDSLKYLTPIAYDVLAYCIIEALGNPQKERLKLEDTNLSSWLQILASFSAN
IFKKYPVDLTGLLQYVTNQLKAGKSFDLLVLKEVIQKMAGIEISDEITAAQLEAMAGGEL
LKAEF
NT seq 2178 nt   +upstreamnt  +downstreamnt
atggaaggaatgcagaaactcgtgaagaattggtcctcaaaaggcagagaagaagcgttg
gctcttttcaaagagagtttttcgacatttaatcatgacagcatactgagtcttcacaga
tctgctgaaagctctttatatggattgttttacgatctcttctcatgttgtattaataat
gagattgattcagatgaggttggggatttctgtaaatcacttttaacgtcattagactct
tctccaatcctctcttctctcatcactgacgtattatcatcattagatgctgaggtctca
tgcagtgaagacaagtctcaaagaaagtcgctgaggtctctaaccctctcactagtgagc
gtgactggtgatgatttattgaaggaaagattagatatggactcgctggaaggagctggt
ttcatatcatcaaagaacagcttcaatcaaaaatatgtgaagactaaaactaaaatatat
tataagcaacagaaatttaatctttgccgcgaggagaacgaaggattctcaaagctcata
agcgagctgggacatgagcctctggtgggcgtggaccatggacaagtactggacagcatc
aagtcattaataggtagattcagtatggatcctaatcgtgttctggatgtcattcttcaa
gcgtttgagtctcatttcgaccagcgacacttcttcatacctttattaagaagctaccct
tgttccccatcaaccttcattaatatactcgggttcaagtatcatacttaccacctgtct
gattctgatggtcagtgtccccctacccctccctctctctactccctcactgctgtactg
ctgaacgaaggaatgattaatatacatggactcacacctcacttacgtctatcaatggaa
gagtttaaggagctccaccagtcaatagctgataatgctaatgctatttatagaaaggcc
aatatagtgacactgacggacaaaactgatgaggagaaggagaaagaggcagaggcagct
caaaaattaaaagaagatcataaagctaagctatcccttgaacataaccaggtccttggg
atatgccacgcctgtttagaacaaggagactggccgtccgctagatcaatcattaaccag
ctacccccaaaccttgcaatggcatcgccacagctggtccagagcttatgtagactagtt
gagtattgtatagaaccactttatagacttcacgccccacgtggcaccactccttctcct
ttatcctcttccttctccatctctcgctgtcagtcatttaaagatatggttcccatggcg
atggagatgatctatgccttagggccacacctccacagtgacccgatcctattgtgtaag
atagttcgactgggtaaagcctttttgaaagagatgttccctggcagtgatccatccaga
accatcactaacgaacacctcgagaatgaggttttgagatggttcttatcaatcattgat
ggtgtggtccttccttctctatcaatgttacagtttaattgtgggatggcggaagaggtg
tggtctatgattagactcctcccgtatgaaacaaggtacatgttgtatggctactggaag
aatgagagttacagcaatcaccctgacctgcttatagttaaatgtgataccttgaataaa
gggaagtacattatgaaacgactaactaaagataatgtgaagcagtctggtagacagttg
ggtaagctaaacaacagtaaccctggaatcatatttgattatgttctatctcagatccag
cgttacgataatttcattattccggtcgttgattctttgaagtacttgacgccaatagct
tacgatgtactggcatactgtatcatagaggcactgggtaacccacagaaagagcggttg
aaactagaggatacaaacctctccagctggttacagatactggcctccttctctgctaat
atattcaagaagtacccagtagatctcaccgggttattgcaatatgtgaccaatcagctt
aaagcagggaagagttttgatctattggtactaaaggaggtgatacagaagatggctggt
atagagattagtgatgagatcacagctgctcagttggaggcaatggctggaggagaacta
ctgaaagctgagttttag

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