KEGG   Amphimedon queenslandica (sponge): 100635090
Entry
100635090         CDS       T02284                                 
Name
(RefSeq) DNA excision repair protein ERCC-8-like isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03420  Nucleotide excision repair
aqu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100635090
  09124 Replication and repair
   03420 Nucleotide excision repair
    100635090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aqu04121]
    100635090
   03400 DNA repair and recombination proteins [BR:aqu03400]
    100635090
Ubiquitin system [BR:aqu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100635090
DNA repair and recombination proteins [BR:aqu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100635090
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WD_LRWD1 Beta-prop_RIG_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_SCAP WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 100635090
NCBI-ProteinID: XP_019863463
UniProt: A0A1X7SLI9
LinkDB
Position
Unknown
AA seq 269 aa
MDKTLRIWDTNEMCVVENFKMSTPIYTHDLAKAIKHTLTAVGTKDGIVTICDMNSGSSSH
ILKRHKKPVMTVQWSPSDEYTLATGSQDNQILFWDIRKARCPLVSLDQHNGSQGKNSTAH
NGYVLGLQFTTDGLFLISSGSDQRLRLWDVSSTSNMLINYGRIPHSFKNQTHHFSLTPPS
LSFTPHLLVPSHSDVSIYELFTGKTVSKLKGHYSSVTSIDVNSNDIEVYTGSTDNTVLIW
TPVNSIELNTESKLSRQSVIYNDTWSDED
NT seq 810 nt   +upstreamnt  +downstreamnt
atggataaaaccttaagaatatgggatactaatgagatgtgtgtagtggagaattttaaa
atgagtacaccaatttatacccatgatttagcaaaagcaataaagcacactttgacagct
gttggtaccaaagatggcatcgttaccatatgtgacatgaactctgggtccagtagtcat
atattaaagagacacaagaaaccagtaatgacagtacaatggtcaccttctgatgaatat
acgctagctacaggaagtcaggataatcagattttattttgggatattcgtaaggcaagg
tgtcctttggtatcgcttgatcaacacaatggcagccaaggaaaaaactctacagcacac
aatggttatgtattaggtctacagtttacaactgacggtctattccttatcagctccgga
tcagaccaacgtcttagactatgggatgtatcctctacctctaacatgctaattaactat
ggccggatccctcactcgtttaaaaatcagactcaccacttctctcttactcctccttct
ctctctttcactcctcatcttttagttccctctcattctgatgttagtatatatgaacta
tttactggtaaaactgttagtaaactgaaaggtcattatagcagtgttactagtattgat
gttaattctaatgatattgaagtgtatactggtagtactgataatacagtactgatatgg
actcctgttaatagtattgagcttaatacagaatcaaaattatcaagacaatcagtaatt
tataatgacacttggagtgatgaagattaa

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