Amphimedon queenslandica (sponge): 100635183
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Entry
100635183 CDS
T02284
Name
(RefSeq) THO complex subunit 5 homolog A-like
KO
K13174
THO complex subunit 5
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03013
Nucleocytoplasmic transport
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100635183
09122 Translation
03013 Nucleocytoplasmic transport
100635183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100635183
03041 Spliceosome [BR:
aqu03041
]
100635183
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100635183
Spliceosome [BR:
aqu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100635183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
100635183
NCBI-ProteinID:
XP_019850905
UniProt:
A0A1X7V2C1
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MLFVQSEGYSKAEDSLLKVIVDGNLEEAKTFDTTGQKEETQQDEETESEQSGTKKKKRRK
SMKPSPEDESTPPCRVSFPLTVSLKITTKCVGSVTICFYYLPFFNAVCSSVTSIDLETDH
ASLKDIFVDKSFLLHNLFEGDSGKFSPNSAVSVQIRKYGGTNFSAAVRQYGFPFKWVQQV
CGITVLSDAGVEFSDIKLDNEVSSSSLVDVVTNVRDRMISQLNLSKQLLSLEQLKIPDVP
PEDDKDEDNPKRPSLSVLSRWKSLSLSEVQSSQFGGLSIFNIQERANRYFLATFSQETAR
WHSIICVSPEYPRVKPVLIVLVELTEKQREPYNLQLKNIEADVNIHYPLTLKPDPFGENL
LSLQLLRLQVLVENYIQIRTGSSSLKDLSLSTRGKGRLITALELIYS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttgttcagagtgaaggatacagtaaagctgaggattctttgcttaaagtcatt
gtcgatggtaatctcgaagaagcaaagacctttgacactaccggacagaaagaagaaaca
caacaagatgaagagacagagtcggaacaatccggaacaaaaaaaaagaaacgacgtaaa
tcaatgaaaccatcgccagaggatgagtctactcctccctgtagagtctcctttccactc
actgttagtttgaagatcactactaaatgtgttggctctgtcactatttgtttctattat
ttgccatttttcaacgccgtctgctcctcagtgacttccattgatctagagacagaccat
gcttccttgaaagacatttttgtcgataagtccttcctgttgcataatctattcgaaggc
gattctggaaaattttcccctaattcagccgtctctgtccaaattagaaaatacggcgga
actaatttctcagctgcagttaggcaatatgggtttccttttaagtgggtgcagcaagta
tgtgggataacagtattatcagatgcaggggttgagtttagtgacattaaactggacaat
gaagtatcatcatcttctcttgttgatgtagtgactaatgtcagggacaggatgatctct
caactcaatctgtccaaacagctgctttctttagagcaacttaaaatccctgatgttcct
cctgaggatgataaagatgaagacaatcccaagcgtccttccttgtctgtcttgtcgcga
tggaagtctctttcactatctgaagtccagagctctcaatttggaggtctttcaatattc
aatattcaagagagagcaaaccgatacttcttagctacttttagtcaggaaacagctcgt
tggcattccattatctgtgtctctcctgaatacccgagggtaaagccggttcttatagtc
ctggttgaattgacagagaagcagagagagccatacaatttacaactgaaaaacattgaa
gctgatgttaacattcattaccctctcactcttaaacctgatccatttggtgaaaacctt
ctctcactccagctcctaaggctacaggtgcttgttgagaactacatacaaatcaggact
ggctcaagtagtttgaaggatttgtcactaagcaccaggggaaaaggaagactcataaca
gctctagaactaatttacagttaa
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