Amphimedon queenslandica (sponge): 100635760
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Entry
100635760 CDS
T02284
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1-like
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100635760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100635760
Enzymes [BR:
aqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100635760
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100635760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
CbiA
AAA_18
nSTAND3
MMR_HSR1
AAA_22
AAA_24
TniB
AAA_16
Motif
Other DBs
NCBI-GeneID:
100635760
NCBI-ProteinID:
XP_019859292
UniProt:
A0A1X7VQ63
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MADKEEEDTRPMKDWILVQNSELRLEVQNDNSVDIQLLFGVAEIFGTEMAKNMRYTISNQ
AKIAIFTDISCTIRILGSPDIAYVSTDTPMHIYRNTHFALEHLRRTAQQNDTFGPKVMVC
GPTDVGKSTLCRLLSNYAVRSGHQPILVDIDVGQSDISIPGSIGVLPIERPAGIEENEFL
KPGSLVYHYGHNNPASNLKFYDTLVSKTFEMYQERCKENPTNKYSGCIINTCGWIDGSGY
KCLLHCAKVYEVDAVLVLDHERLCIDFQRDLPKTTSIIRLPKSGGTVVRGREFRKNHRNN
VVREYFYGKKGSLSLFPFSFEVPFSEVSVYKIGAPEVPESCLPIGATAEDGNTQLVPVEI
NKDLVNRIVSLSMATSLEENVVSCSSAGFLCITAVNTDAETITVLSPAPSPLPRKFLLLS
DIEFVDFK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaagaggaggaagatacgcgtcccatgaaggactggatattggtacaaaat
tctgagcttagacttgaagtgcaaaatgacaacagtgtggacatacaactcttgtttggt
gtcgctgagatatttgggacggagatggcaaagaacatgcgctatacaatctccaatcaa
gcaaagattgcaatattcaccgacattagctgcaccataagaatcctaggctcacctgac
attgcttacgtttccacagacactccgatgcatatttatcgtaatactcactttgctctt
gagcatttgaggaggacagcacaacagaatgatacctttgggcctaaagtaatggtatgt
ggccctactgatgtaggtaagagcactttgtgtcgtctcttatcaaactatgccgtgaga
tctggacaccaaccaatacttgttgacattgatgttggtcagagtgacatctccatacct
ggctctattggagttctaccaatcgagagacctgctggtattgaggaaaacgagttcctc
aaacccggcagtcttgtttaccactatggtcacaataatccggcctcgaacctcaagttc
tacgatacgctcgtcagcaaaacctttgaaatgtatcaggagagatgtaaagagaatcca
acaaataagtacagtgggtgtatcattaacacttgcggctggattgatggaagtggctac
aagtgcttacttcattgtgctaaagtgtatgaagttgatgctgtgttagtgttggatcac
gagagactgtgtattgatttccagcgagacttacccaaaaccacatcaatcataaggctg
ccaaagtctggaggaactgtagtcagaggtagagagtttcgtaagaatcacagaaataat
gtcgttcgggaatatttttacggcaaaaaaggatccttatctttgtttcctttctccttt
gaagtgccattttctgaagtctctgtttataaaattggagctcctgaagttccggagtct
tgtttaccgattggagcaacggcagaagatggcaacacacagctagtacctgttgaaata
aacaaagatcttgttaataggatagtaagtttaagcatggcaacttcacttgaagaaaat
gtagtcagctgtagcagtgctggatttttatgcataacagctgtcaatacagacgctgag
accatcactgtactctcgccagctcctagtcctctaccaagaaaatttttactgttgagt
gacattgaatttgtggactttaaataa
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