KEGG   Amphimedon queenslandica (sponge): 100635981
Entry
100635981         CDS       T02284                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100635981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aqu03041]
    100635981
Spliceosome [BR:aqu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    100635981
 Complex C
   U5 SnRNP specific factors
    100635981
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WDR54 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 100635981
NCBI-ProteinID: XP_019849536
UniProt: A0AAN0IYK7
LinkDB
Position
Unknown
AA seq 387 aa
MAFPPRSQQGGILVPHQQYAGGQGLIPLPPQQHGLATALMPTGPPRTTSLQAPIMRLLGH
QGEVYTSKFSPTGSTLASGSFERLIFLWNVYGDCENYCVLKGHQGAIMDLNYSTDGTMLF
SVATDKLGAVWDVEVGARVKKLKGHSSFVNSVSSSQRGSQIIATGSDDGTARVWDLRSRF
ASQNLNNTYQITSVLFNSTSDQLITGGLDNDVKVWDLRNEEVLYTLAGHNDTITSLSLSA
NGHYIASNGMDNTVRIWDVRPFTQDQHAFMFMCCVICYAACGMRCFTSELCYIINVVLNL
IINSFSCLFFVCLLCQNLLGCSWSPDGRLVAAGSADRYVYVWDTITGHIRYKLPGHQGSV
NDVDFHPKEPILLSCSSDKTLYLGELQ
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggcattccctcctaggtcccaacagggaggcattctagtccctcaccagcagtacgct
ggaggacagggactcataccgctccctccacaacaacatggactcgctacagccttaatg
ccaacagggccaccaagaaccacgtctctacaagctccgataatgagactcttaggccat
caaggcgaagtgtatacttctaaatttagcccaactgggagcaccttggcctcgggatcc
ttcgaaagactaatatttttatggaatgtctacggagactgtgagaattattgtgtatta
aaaggacaccagggagccatcatggacctcaattattcaactgatggaactatgctattt
tcagtggctactgataagttgggtgctgtatgggacgtagaggttggtgccagggtcaag
aaacttaaaggacactcctcattcgttaatagcgtgtcctcctctcagagggggtctcag
attattgccactgggtctgatgatggaacggctagagtttgggatttacgaagtcgtttt
gcctcgcaaaacctcaacaacacgtatcagatcacgtccgtattgttcaactctacaagc
gaccaattgattaccggtggccttgacaacgacgttaaagtttgggatctccgtaatgaa
gaagtattgtatactctagctggtcataatgataccattactagcctcagcttaagtgct
aatggacactacatagcatcgaatggaatggataacactgtgagaatatgggacgtgaga
ccttttactcaagatcaacatgctttcatgtttatgtgctgtgtgatctgttatgctgcc
tgtggtatgcgttgcttcacatcagagctttgttatatcattaatgtggtattgaatctc
attattaactcattttcgtgtttattctttgtttgtcttttgtgtcagaatctcttaggc
tgtagctggtctccagacggtcggttggtagcagctggatctgctgacagatatgtgtat
gtatgggacaccattacgggtcacatcagatacaagttacctggacaccaaggcagtgtc
aatgatgtggatttccatccaaaagagccaattttactctcttgctcaagcgacaagact
ctgtatcttggtgaacttcagtaa

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