Amphimedon queenslandica (sponge): 100636188
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Entry
100636188 CDS
T02284
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100636188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100636188
Spliceosome [BR:
aqu03041
]
Complex C
Other components
Step II factors
100636188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
100636188
NCBI-ProteinID:
XP_003384053
UniProt:
A0A1X7VJI7
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MATSLPLVEYGSSGEGSDEDAPEINYEESAKVLSSLKDKFSMNSTPAVRNKEPQTNLLRI
DSKTKEITYNPTYEQLFAPEVGPVNPNKTQQQLAHKNMLSGFMEPAHIDLFQFENQRRTY
QSFGFAVDPSADKSGNELEYIGDVGTMMEHGGASIFEKKVVRTGEKRKRLEKGDPAVIDG
YQGPWREYKDQIKVSCPTPEEKAIIEAQKGSKLKKKRRDEEEETIEETTVLHIDDPVDYM
GRSFLHIPQDIGINLRSEDPPEKCFIPKKCIHTWSGHTKAVSNCRLFPKSGHLVLSGSMD
NNLKLWEVYNERRCIRTYSGHIKAIRDICFNNDGSKFLSCAYDRYIKLWDTETGQCINHF
TNQKTAYCLAFNPDEDKQHLFIAGCVDKKIYTWDTTSGEIVQEYDRHLGPVNTVTFVDEN
RRFVSTSDDKSLRVWEWDIPVDMKYVAEPHMHSMPAVTLDPTGKWLACQSMDNQILCYGV
HTNFRLNRRKAFKGHNVAGYSCKIAFSPDASIVASGEANGSVCFWDWKTKKMKSKFKAHE
GVCIAVRWLPHETSKVVTCGWDGLLKLWD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatccctccctctggttgagtatggctccagtggggaaggaagcgatgaagat
gctcctgaaataaattacgaagaatcagcaaaagttctctcatctctgaaggataaattt
tcaatgaatagcactcctgccgtcaggaacaaagagccacagactaatctgctaagaatt
gactcgaagacaaaagaaataacttacaatccgacgtatgagcaactgtttgcacccgaa
gttggcccagttaatccaaacaagacccagcagcaattagcacacaagaacatgctctct
ggattcatggagccggctcacattgacttatttcaatttgaaaaccagcggaggacctac
caaagctttggttttgctgttgatccttcggctgataagagtggaaatgaattggagtat
attggagatgtgggtactatgatggaacacggaggggctagcatttttgaaaagaaagtg
gtgaggacaggagagaagagaaagaggttagaaaaaggagaccctgctgtcattgatggc
taccaaggcccatggagagaatataaagatcagataaaagtgtcttgtccaactccagag
gaaaaggcgataatcgaggcacagaaaggaagcaaattaaagaaaaagagaagagatgag
gaggaagaaacaatagaagagactacagtgctacacattgacgaccctgttgattacatg
ggccgttcattccttcacatacctcaagacattgggatcaatctaagatccgaagaccca
ccagagaagtgcttcataccaaagaagtgtatccacacatggagtggtcatacaaaggca
gtgtctaactgcaggctgtttccaaagtccggccatttggttttatccggttctatggat
aataatctgaagttatgggaagtatataacgagagaagatgcattaggacatattcgggt
cacattaaagccatacgggacatttgtttcaataacgacggatcaaagttccttagctgt
gcgtatgatagatacattaaactgtgggacaccgaaacaggtcagtgtatcaatcatttt
acaaatcagaagacggcgtactgtcttgcctttaatcctgatgaagataagcagcatcta
ttcattgctggctgcgtcgataagaaaatatacacatgggacactactagtggtgagata
gtgcaagaatacgacagacatcttggtccagtgaacacggttactttcgtcgacgaaaac
agaagatttgtctctacgtctgacgataaaagccttcgagtttgggaatgggatatacca
gttgatatgaagtacgtggctgagcctcacatgcactcaatgccagctgtcactttggac
ccaactggtaaatggctagcctgtcaatcaatggataatcagatattgtgttatggagta
cacactaacttcagattaaacaggaggaaagcattcaaaggacataatgttgccggctat
tcgtgcaaaattgcattctcacctgatgcaagtattgttgcttcaggagaggcaaacggc
tccgtttgcttctgggactggaaaacaaagaaaatgaaaagtaaattcaaggcgcatgaa
ggcgtgtgtattgctgtaagatggctgcctcatgaaacatcgaaagtagtcacctgtggc
tgggatggactattgaagctttgggactaa
DBGET
integrated database retrieval system