Amphimedon queenslandica (sponge): 100636323
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Entry
100636323 CDS
T02284
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aqu03009
]
100636323
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100636323
Ribosome biogenesis [BR:
aqu03009
]
Eukaryotic type
Pre-60S particles
Helicases
100636323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
100636323
NCBI-ProteinID:
XP_011403344
UniProt:
A0A1X7V302
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MASTWEEINPSLSPQTLSVLRDNGFFSPTPVQSLVLPHFLSNKDVSVQAVTGSGKTLSFV
IPVIEKLKKRKQKWRRGETGAIVILPTRELAVQVSEVFNLFITGAGISLRQLIGGSQEVV
KDVRLINEEGGIVVVATPGRLADLLERKDCHLAAGVRSLEILILDEADRLLDLGFEATLN
TILSYLPKQRRTGLFSATLRHEVEMLIRSGLRHPVNITLSSESMESTVPDSLINYYIEVP
PKDKLSHLVGFLSHHETEKLLVFYATCAGVSYFSDLIKRLLPSLKVLALHGKMREKRQSL
FESFMDMESGVLMCTDVMARGIDIPDVDWVLQFDPPSSEKAFIHRCGRTARMGRRGHSLT
YLVPPSELAYVEYMRISEGVTLELLPETEIGRIPSSSALIERARAELSKEREFYDKSVRA
FVSFVRFYSKHSYHLIFNMKVLDLVSLAYGTFALLHLPKMPELKGKDTSQFEAHPISLEA
IPFKERSREKQALALKRKKEAAWMAKAEARKKFLKRKNREERRISRKNTRQNKHTFSASE
LDELAKEARLVKQYKARKISKEDLEAQLDS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcctccacttgggaggagataaatccttccctttctcctcaaactctctctgtactg
agggataatggcttcttctctcccactccagtgcagtctctagtattgcctcattttcta
agtaataaggacgtttctgttcaagcagttacggggtcagggaagacactctcgtttgtt
attcccgtcatagaaaaactcaaaaagaggaaacaaaaatggaggagaggagagactggt
gctattgtgatactaccaacacgggaattagccgtccaagtctctgaggtttttaattta
tttattactggggcgggaatctcgctgcgacagttaatcggaggtagccaagaagtggtg
aaagatgtgagactcataaacgaagaaggtggtatagtcgttgtagctactcctggtcga
ctggccgatctgttggaacgaaaggattgtcaccttgcagctggtgttagatcactggag
attctgatattagatgaagccgaccgtcttttagatcttggatttgaagcaacgttaaat
actatattgagctatctaccaaagcaaaggagaacgggcctattttcagctactcttagg
cacgaggtcgaaatgctaataaggagtggactcagacatcctgttaatatcacactttca
tcggagtcgatggaaagcactgtcccggattcgctaataaattactacatagaagttccg
cccaaagataaactttctcatctcgttggttttctctctcatcatgaaacagagaaatta
cttgtattttatgcaacatgtgctggagttagctatttctcagacctaattaaaaggtta
ctgccttctttaaaggtcctggcattacatggtaagatgagagagaagagacagtcgctg
tttgaatctttcatggacatggaaagtggcgtcctgatgtgcactgacgtaatggctaga
ggtatagatatacccgacgttgattgggtgctacaatttgatcctccttcgtctgaaaaa
gcttttattcatcgctgcggccgaacagcaaggatgggaaggcgtggtcatagtttaacg
taccttgttcctccatcagagctggcatatgttgaatacatgcgcattagtgaaggagtc
actttggagttactcccagagacagaaattgggagaataccatcatcttctgccttgata
gagagggcgagggcagagctctcgaaagaaagggagttttatgataaaagcgtaagagct
tttgtatcgtttgtcagattttacagtaaacacagctaccacctaatattcaacatgaaa
gttctagatcttgtctcacttgcttatgggacttttgctttgctccacttaccaaaaatg
cctgaactgaagggaaaggacacctctcaatttgaggctcacccaatcagtcttgaagca
ataccattcaaagagagaagtagagagaagcaagcactggcacttaaaagaaagaaagag
gctgcttggatggctaaggctgaagctagaaagaaatttctaaagagaaaaaatagggaa
gagagacgcatatccaggaaaaacacaaggcaaaataaacataccttttctgcttctgaa
ttggatgagcttgctaaagaagcacgtttggttaaacagtataaagccagaaagatttca
aaagaagatttggaggcacaattagactcttaa
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