Amphimedon queenslandica (sponge): 100636896
Help
Entry
100636896 CDS
T02284
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like
KO
K12821
pre-mRNA-processing factor 40
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100636896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100636896
Spliceosome [BR:
aqu03041
]
Complex A
U1 snRNP components
U1 related factors
100636896
Complex B
100636896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Glyco_hyd_101C
Recombinase
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
100636896
NCBI-ProteinID:
XP_011402836
UniProt:
A0A1X7VUB3
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MANYPPPPGHPPPGMFGGGGFPPGHPPGNRPPFNTGLLPPPPPTQFMPPPGGQMPGGQMH
GGQMPFPGQMPGLPPGMPPPGMPPPAQVPSQPGIPPPTQMGFGGQIPPHQLPPGMQPPHN
IGPASVPTGMMPQQIQLQQDPAGMMASTSMPSLVSQQYLQQQPVMPVLQQPAVLEVPVPQ
MSKSVSPVPRDTLASSKSSSPPSIKPPEVKKKKKKKKEKKLSGPWSMHNAPDGRTYYYNS
ETKQSSWQKPDELKTKAESLLSKCLWKEYKNDSGKIYYYNSETKESTWTLPKELEQLRAE
ASKLEEEESSGESVTDSSDDEEKPEEAEKVQEDSQPVYANHEEAKQAFKDLLKEKNIPST
STWDQAMKQIIEDPRYKAIKKMNEKKQVFNMYKTQKAKEEKEEQRQVAKKNREELRKVLE
EHEEIHSQTRWRRVSDIFEDHPLWKAMTHDDRKNVFEDVIFALGEREKERERQQRERNCQ
VLLKIFDAMDFMTYKTTWAQAYKALQDHPIYTSDDELQVMDKEHILDTFENHIRKLEKEE
AENKKKEKDREKRLQRKRREAFQLLLEELHESERLTSTSYWKTLYPAFSQDQRYTDMIGQ
PGSTPLDLFKFYVEDLRLRFHEEKKIIKEILKDRNFSVELSTSIEEFKTVIFSDERSNGV
DKGNLTTAFDIYIEKAEAREKERLKAEEKKQKKRESAFKQMLKEADPPIESTDNWEDVRS
RFMGQPGFEQIPEESARLSVFKEFLKTVKELGERDDTDEEKEAMAAKEPKEKKSKSVKEK
EKKTSHRSHKKTKKRKRSKSVSSGSDDDDRGHYHSRRRSPSYSMSEGEERDSRKSKKHKK
KSKKKRHHSSSESEGEIRSSGPSSSKKAKRSKHDDHDHQKKQKVDTSSKSQPLPAAYSSA
SEGEIQD
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggccaattaccctcctccccctggccatcctcctcctggtatgtttggaggtggtggg
tttcctcctggccaccctccaggaaacaggccgccatttaatacaggactcttgccacct
ccccctcccacacaatttatgccgcctcctggtggtcagatgcctggcggtcagatgcat
ggtggtcagatgccgtttcccggtcaaatgcccgggctacctcctggcatgcctcctcca
ggaatgccccctcctgctcaagtacccagtcaaccgggtatccccccgcccacacagatg
ggatttgggggtcagatccctcctcatcagttgccacctggcatgcagcctcctcataat
attggaccagcctcggttcctactggaatgatgccgcaacaaatacagctccagcaagat
cctgccggtatgatggcctcaacaagtatgcccagtttagtctctcagcaatacttgcaa
cagcaacctgtcatgccggtactacaacagccagcagttttggaagtcccagtgcctcag
atgtctaagtctgtcagccctgttccccgggataccttagcatcctcaaagtcttcatct
ccaccatcaataaaaccacctgaagtcaagaaaaagaagaagaagaagaaggagaagaag
ttatctggtccctggtcaatgcacaatgcgcctgatgggagaacttattattataattct
gaaactaagcagtccagctggcagaaaccagatgaactaaagaccaaagcagagtctctt
ttatcaaaatgtttgtggaaagagtataaaaacgattctggaaagatctattattacaat
tccgagacaaaagaatcaacttggacactgcctaaagaattggagcaattgagagctgaa
gctagcaagcttgaagaagaagagagctctggtgagagtgtgacagacagtagcgatgat
gaagagaaacctgaagaagcagaaaaagtgcaagaagactcccaaccagtttatgcaaac
cacgaagaagctaaacaagctttcaaggacctcctgaaagagaagaatatcccctctacc
tccacttgggaccaagccatgaagcagatcattgaagacccacgctacaaggccatcaag
aagatgaatgaaaagaagcaagttttcaacatgtacaagacccagaaggcaaaagaggag
aaggaggagcagagacaggtcgctaaaaagaatcgtgaagagcttcgtaaggtccttgag
gaacacgaagagattcactctcagactcgttggaggagagtcagtgatatatttgaggac
cacccgttgtggaaagcaatgacacacgatgatcgaaaaaatgtgtttgaggatgtcatc
tttgccctcggtgagagagagaaggagagggagagacagcagagagagaggaactgtcaa
gttttactaaagatatttgatgccatggactttatgacttacaagacaacatgggcacag
gcttacaaggcactacaggaccatcctatatacaccagtgatgatgaattacaggtaatg
gacaaagagcatatattggacacttttgagaatcacatacgaaagcttgagaaggaagaa
gctgaaaataagaagaaggagaaagaccgtgaaaagagactacagaggaagagacgtgaa
gcatttcagttattactggaggagctacacgagtcagagagactgaccagcacctcttat
tggaagactctctatccggccttctctcaggatcagcgctacactgatatgatcggacaa
ccaggctccactcctcttgatttattcaagttttacgttgaagaccttcgactacgtttc
cacgaagaaaagaaaataatcaaagagatattgaaggatagaaacttttccgttgagcta
agtaccagtattgaggaattcaagactgttatattttccgatgagaggtctaatggagtg
gataaagggaatttgacaacagcttttgatatctatatagaaaaagcagaggctagagag
aaagaaagattaaaagcagaagaaaagaagcaaaagaagcgtgaaagtgctttcaaacaa
atgctgaaggaggctgaccctccaatagaatctactgacaattgggaagatgtaaggagt
aggtttatgggccagcctggctttgaacagataccggaagaatctgcgagactaagtgtc
tttaaagaattcctcaagacagtaaaggagctaggggagcgtgatgacacagatgaggag
aaagaagcaatggctgccaaagagcccaaggagaagaaaagcaaaagtgtcaaagaaaaa
gagaaaaagaccagccatcgctctcacaagaagacaaagaaaaggaagagatcaaaatca
gttagctctggttctgatgatgacgatagaggccattaccacagcaggcgtcgctcccct
agttactcaatgtccgaaggtgaggaaagagattcaaggaaatctaaaaaacataaaaag
aagtcaaaaaagaaacgtcaccatagttcctcagagtctgagggtgagattcgtagctct
ggtcctagcagctcaaagaaagctaagagaagtaaacatgatgaccatgatcatcagaag
aaacaaaaggttgacacctcttccaaatctcagcctcttccagctgcatattcatcagca
agtgaaggagaaatccaagattag
DBGET
integrated database retrieval system
