Amphimedon queenslandica (sponge): 100636927
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Entry
100636927 CDS
T02284
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100636927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100636927
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100636927
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100636927
Messenger RNA biogenesis [BR:
aqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
100636927
DNA repair and recombination proteins [BR:
aqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
100636927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100636927
NCBI-ProteinID:
XP_019858144
UniProt:
A0AAN0JMY9
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MAYHLDEEALELLIRDSASSCGYPLLKDQQKQVVLSFCQGKDIFACLPTGFGKSACFVIL
PKLFDLLRKESPGHSIVIVISPLNSLMKDQVRSCRERGVAAAAVTHDDKSSEEEAIKGGF
QIVYISPEMILGTKKWRSVLDSNLYQSRLVGLVIDEAHCVKTWGDDFRQMFKELGHLRAL
IPTGTNMMALTATATTRSRLEICLRLGMENPHVVQLSPDKPNIFLSCNEFDSIPASFGLL
AKRLKEERTKMGRVIIFCKKIALCSQIYSYFLYILREGFTEPRGVSVASIESRLVDMFTS
GTHPEVKEVILKSFQSQTAPLRIVIATIAFGMGIDCPDVREIIHVGPPSDVEDYVQQIGR
AGRDNLPSFATVLYGRNLMRNTSKTMLEYCRRNDLCRRNFLFSEFDSYSPSYNRGCHCCD
VCSIICSCFNCSFN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccaccttgatgaagaagctttggaacttcttatacgtgattctgcctcatct
tgtggatatccattgttaaaagatcaacagaagcaggttgttctttccttttgtcaaggg
aaggacatttttgcctgccttcctacagggtttgggaagagtgcctgttttgtcattctt
cccaaattgtttgatttactgaggaaggaaagtcctggtcacagcattgtaatagtaatc
tctccattaaacagtttgatgaaagatcaagtgagaagttgtcgggaacgaggtgtagca
gcagcagcagtgacacatgatgacaaatcgagtgaggaggaggcaataaagggagggttt
cagatagtctacatcagtccagagatgatattgggtacgaagaaatggcgttctgttctg
gacagcaatctttatcagtcaaggctagttggattagtaattgatgaagcgcactgtgta
aaaacttggggtgatgattttcgtcaaatgtttaaagagttgggccatttaagggcattg
atccccactggtaccaacatgatggcactaacagcgactgccacaacaagatctagacta
gaaatatgtcttcgactaggcatggaaaatcctcatgttgttcaattatcgcccgacaaa
cctaacatattcctgtcatgtaatgaatttgactcaatcccagcatcatttggattgtta
gccaaacgattgaaagaagagaggacgaagatgggaagagttattatattttgtaaaaaa
atagctctgtgtagtcagatctattcgtatttcttatatatattacgtgaaggttttaca
gaaccaagaggagtttcagttgctagtattgagtctcgtcttgtggacatgtttacatct
gggacgcatccagaagtgaaggaggtgattttgaagtcttttcagtctcaaacagctccc
cttcgtattgtcatagctaccattgcttttggtatggggatcgattgtcctgatgtgcga
gaaatcatacatgttggaccaccaagtgatgtagaagattatgtacaacaaatagggcgt
gctggtcgtgacaatcttccttcttttgccactgttctgtatgggagaaacttaatgcga
aacacaagcaagactatgctagagtactgcaggcgtaatgatctatgtagaagaaatttc
ttgttttcggaatttgattcatattcaccaagttataacagagggtgtcactgttgtgat
gtatgttcaattatatgttcttgcttcaattgttcttttaattaa
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