KEGG   Amphimedon queenslandica (sponge): 100637789
Entry
100637789         CDS       T02284                                 
Name
(RefSeq) THO complex subunit 3-like isoform X2
  KO
K12880  THO complex subunit 3
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03013  Nucleocytoplasmic transport
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100637789
  09122 Translation
   03013 Nucleocytoplasmic transport
    100637789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqu03019]
    100637789
   03041 Spliceosome [BR:aqu03041]
    100637789
Messenger RNA biogenesis [BR:aqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100637789
Spliceosome [BR:aqu03041]
 Complex C
  Other components
   EJC/TREX
    100637789
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100637789
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd eIF2A PAC11 Beta-prop_TEP1_C WDR90_beta-prop_4th DSE1_N Beta-prop_EML WD40_MABP1-WDR62_1st Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_EIPR1 NBCH_WD40 PD40 TRM82_WD Beta-prop_SPT8 CFAP251_N Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 DPPIV_N Beta-prop_ELP1_1st PROPPIN
Other DBs
NCBI-GeneID: 100637789
NCBI-ProteinID: XP_003384776
UniProt: A0AAN0IBP0
LinkDB
Position
Unknown
AA seq 338 aa
MGVVTRGAIMSSNNKKSNGKEDSYSGLCSHFEANKRSKEYVAHQSKVHSVGWSCDGSRLA
SGSFDKSVTIWSLESDRLGRDGNYKVHTGSVDQLRWHPSKPEVLVTASGDKTIRVWDTRA
GKPTSTVTTKGENINICWSPDGHTIAVGNKEDLLTFIDARTLKTKHEELFKYEVNEISWN
RPGDKFFLTNGNGCVVILSWPEFKHLHTINAHPANCICIEFDKSGKYYATGSADALTSLW
DVSELVCLRTFSRLDWPVRTLSFSHDSQMIASASEDLFIDIAHVQTGQKVHQITTQAPTF
TVAWHPKKHLLVYACDDKDKHDRDTGGIWLFGLPNTTY
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggcgtggttacacgtggagccatcatgtcttctaataacaagaagtcaaacgggaaa
gaagattcttattctggtctttgtagtcattttgaggctaacaagagaagcaaagaatac
gtagctcaccaatctaaagtccattctgttggttggtcctgtgatggatcacgcttagcg
agtggttcgtttgataaatcagttacgatatggtccctggaatctgacagactgggaagg
gatgggaattacaaggttcacacgggcagtgttgatcagttgaggtggcatccaagcaag
cctgaagtattagtgacagcttccggtgataaaacaattcgtgtatgggacactagagct
ggtaaacctacgagtactgtaactactaaaggagagaatattaacatttgctggtcacct
gatggtcacacgattgccgtaggcaacaaggaagacctactgacattcattgacgctagg
acactgaaaacaaagcatgaagaactatttaaatacgaagttaatgagatttcctggaac
agacctggcgacaagtttttcttaacgaacggaaatggttgtgtggtaatattgagttgg
cccgagttcaagcaccttcacacaataaatgctcacccagctaactgtatatgcatcgag
tttgataaatctggaaagtattatgcaacaggtagtgctgatgcattgacaagtctttgg
gacgtctcagaattagtgtgtctaagaaccttctcaagactagattggcctgtcaggacc
cttagcttcagtcatgatagtcaaatgatagcgtcagcttcagaggatctcttcattgac
atagctcatgtacaaacgggtcagaaggtccaccagatcacaacccaggctcctactttc
actgtggcctggcacccaaagaaacacctgctggtctatgcttgtgatgacaaagataaa
catgatagagacactggagggatttggctctttgggctaccaaacactacctactga

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