Amphimedon queenslandica (sponge): 100638394
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Entry
100638394 CDS
T02284
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100638394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100638394
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100638394
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100638394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
100638394
NCBI-ProteinID:
XP_019854269
UniProt:
A0A1X7UGA7
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MYYTASNSSNARKSSQEMASSTAIGSAPPQPSNLSAMRRGVMMAPVLPLGGTTGPVKKKE
LDEGFMTQSYYNQQSSFLSQQRTDKDGLTPTGLYGMSTGFQSAHPSSRGLTNTPPFSRSS
TAPTYTNNMGGGGGGATPGLPGQYGAPSPPPSRNNLFINSGAVPGGALGVPHSQGVGPLK
HVSRPNTLASAISSGLPLNSYPGLGGNGRGGMMSSFSSTGYSSLSEMSAQSGFDPSEFPV
LGIRSHGDSGLLLGGNRPGYAGQISKPTETSQEFQMRVEDFPSLPGTSTKTSESSELSQE
SAFTTSTSTNPLPESRSTLPYDPAPGGGNKERSSSIGAIGSNSKNVTRKTAVNVPPNMVQ
DHYGMVGLLTFIRGAETDPNLVALALGSDLTTLGLHLNSPESLYSTFSSPFADSPSRPQD
IDYPVPQEYLIHSYIRDKLAPIRLSKYNEDLLFYLYYTSGGDLLQLLAAHELYTRDWRYH
KEEKIWITRAPNMRPTKVETTYEEGTYCYFDLGTWRKAHRDMKVEYDRLAERPSIPPAIT
SQQIVSSVSMSA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtattacactgccagtaacagctctaatgcacgcaagtcaagtcaagaaatggctagt
tctacagcaattggatcagcaccacctcagccttcaaacctatcagccatgagaagaggt
gtcatgatggctcctgtattaccactgggcggtaccactggacccgtcaagaaaaaggaa
ttggacgagggtttcatgacacaaagttattacaaccagcagtcttcatttctctcccaa
caaagaactgataaagacggcctaactcctactggactatatggtatgtccacgggtttc
cagtcagcccatccttcatcaagaggacttaccaacactcctccattcagtcgctcctct
actgcccctacctatactaacaatatgggaggaggagggggaggggcaactcctggactt
cctggacaatatggagccccttctcctcctccgtcaaggaataacctcttcatcaacagt
ggagcggtaccaggaggagcactgggagtccctcactcccagggggtggggcctcttaag
catgtatcaagacccaatacactggcatctgctatcagcagtggtctacctctcaactct
tatcctggccttggggggaatggacggggaggaatgatgagctcctttagctctactgga
tacagctcattatctgagatgagtgctcagtctggctttgatccgtcagagttccctgta
ctgggcatccgtagccatggagactcgggactgctactaggaggaaacagaccaggatat
gctggtcagattagtaaaccaactgaaacatctcaagagtttcaaatgagagtggaggac
tttccctcgctgcctgggacctcaacaaagactagtgaatcttctgaactcagtcaagag
tcagcattcactacctcaacatcaaccaatcctctaccagagagtaggtctactcttcct
tatgatccagcaccaggtggaggcaataaagaaaggtcatcctcaattggtgctattggc
agtaacagtaagaatgttaccagaaagactgcagttaacgtacctcctaatatggtacag
gatcattatgggatggttgggttgttaacgttcattaggggggcggagactgaccctaat
ttagtggcactagcactgggcagtgatttgactacactgggactccatcttaactcacct
gagagtctatacagtacattttcatcaccttttgctgactctcctagtcgcccacaggac
atagattatcctgtaccgcaagaatacctaatacactcttatataagggacaagttggct
ccaatccgtttatcaaagtacaatgaggacctgttgttttatctttactataccagtggt
ggggacctcctgcaattactagcagctcatgaactgtacactagggactggcgctatcat
aaagaagagaagatatggatcacgagagctcccaacatgagaccaactaaagttgagacg
acatatgaagagggtacctattgttactttgatcttggtacctggaggaaggctcacaga
gatatgaaggtggaatatgacagactagctgagaggccctccatacctccagctataact
tcacaacaaattgtatcttctgtgtctatgagtgcatga
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