Amphimedon queenslandica (sponge): 100638414
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Entry
100638414 CDS
T02284
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100638414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100638414
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100638414
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100638414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Phage_Mu_Gam
Motif
Other DBs
NCBI-GeneID:
100638414
NCBI-ProteinID:
XP_019852041
UniProt:
A0A1X7VSA0
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVTEGVETFDDIWGKVQTAANANQKEKYEADLKKEIKKLQRLRD
QIKTWLTSNDIKDKKSLMDNRKLIESRMERFKVIERETKTKAYSKEGLGLAAKVDPAQKE
KEEIRQWLTDIIDHLQRQIDLFESEVETLHSSSKKKKLDREKQERVDELSNWVERHKFHV
QKLETIMRMLDNSSIETDDVKTIQDDLNYYVESNQEPDFAENELLYEDLHLDETAGISTG
FSHFGQCEDDESSLASSPTSSGPLSPKTPTTSGKPLPQSLRDSSHDHPPSELIEERRRGK
TSSLGSDHGNDVPPSPRRPGPKSLTLGSGPSNRGSNNNGGKITTPVSKGSSIGGNNSRTN
SNNIQTTPIAIPSPKGQKGLQQQQVHTPAAATPNNKDTKDQSAVPPPYAVAAAGSGAGNS
SEPAGLTTPDVTSPDGVSADHVTTSSLLIGGNSAVTTTTAHPMRSQGPPSLPSQHSRSSS
TSSSLSPSLTHSGDSLSQNGTVGGGVSNTIDANPPLPSSGPSSQPSVGSPVSLTVSTSIT
SPPDSSPSQSSAKPSPPLAPPSVATVTASHPQQIPVAITTNMMASPGSQYFPSVLPEKIP
AVGGAGGVVIGRSDSYDHEGGLQMGGGGGLPLGMSVLGKQMIGGQSVMFESNLASLSMVA
DPLGDPPSVVTSFPVQTTDSFSPSSLGSFGIPVGGGNSVSGAVDMFGFSTNSSTNPSAVT
DSMSSLKEITTEAILTHGLLNENKRNTSDQNLRALLNPSAAPGSRLDAALSLGTSTTSSL
PRDATPIQPLLGVAPLGPISLGQDKVYQLRMLESAYKHMPEPSDSEKVRPYLQRTPYPTP
PYHPQHSPSHMDSYDFYQRLSIETLFFIFYYMEGTKAQYMAAKALKKLSWRFHTKYMTWF
QRLEEPNTITDDYEMGTYIYFDYEKWAQRKKDGFTFEYRYLEDRDLP
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagagaaagcttcaaggagagatcgatcggtgtctcaaaaaagtcacggaa
ggagtcgagacttttgacgacatttggggcaaggtacaaactgccgctaatgctaaccag
aaagaaaaatacgaagccgatttgaagaaggagatcaagaagttacagcgtctaagagac
caaattaaaacatggctaacatccaatgacattaaagataagaagtctttaatggacaac
aggaaactgatagaatccaggatggaaagatttaaagttatcgaaagagaaacgaaaaca
aaagcttattcaaaagaaggtttaggattagcagcaaaagttgatcctgctcagaaagag
aaagaagaaataagacaatggttgacagacatcatagatcatttgcaaagacaaatcgac
ctgtttgagagtgaagttgagacacttcacagcagttcaaagaagaagaagctagacaga
gaaaaacaggaaagagttgatgagctctctaactgggtggaaagacacaagtttcatgtt
caaaaattagaaactataatgagaatgttggataattcttcaatagagacggatgatgtt
aaaacaatacaagatgacctaaattattacgtcgagtcgaatcaagaacctgattttgct
gaaaacgagttactatacgaggacctacaccttgatgaaacagctggaatttcaacaggt
ttctcacatttcggacagtgtgaggatgacgagagttctttggctagttctccgacgtca
agtggtcctctttcgccgaagacacctaccactagtgggaaacctttgccccagtcttta
agagacagtagtcatgaccaccctccatctgaattaatagaagagagaagaagagggaag
acctcgtcgctgggtagtgaccatggaaacgacgtgcccccatcaccacgacgaccaggc
ccaaaatcactcactttaggatctggtccttcgaacagaggaagcaataataatggaggg
aagatcactacacctgttagtaaaggatcgtcaattggaggaaacaacagtagaacaaat
agtaataatattcaaaccacacccattgcgataccgtctccgaaaggacagaaaggatta
cagcagcaacaggttcatactccagcagctgctactcctaataataaagacactaaggat
cagtcagcagtcccacctccttatgctgtagcagctgctggatcaggagcagggaacagt
tctgaaccagcaggactcactacacctgatgtgacctcacctgatggtgtatctgctgat
catgtgactacttcctctcttctgattggtggtaattccgccgttaccacaacgacagct
catcctatgagatctcaaggacctccatctttgccaagtcagcacagtcgctcaagctcc
acctcctcctccctctccccctccctcactcactcgggagactcactctctcagaacggg
acagtagggggcggagtcagtaatactattgacgctaatcctcctttaccatcatccgga
ccgtcatcacaaccttctgttggatctcctgtctctctcactgtctcaactagtatcact
tctcccccggactcttctcctagtcaatcatcagccaagccctccccacctctggccccg
ccttccgttgctacagtaactgcctcccacccacagcagatcccggtcgccattacaacc
aacatgatggcttctcctggctctcagtatttcccgtctgtgttgccagagaagattcca
gcagtgggtggagctggaggcgtggttattggtcgaagtgatagttacgatcatgagggt
gggttacaaatgggaggaggtggaggactacctctaggaatgagtgtactggggaagcaa
atgattggaggacagagcgtaatgtttgagtccaatctggccagtttgagtatggtggct
gatcccttaggtgatcctccgtcggtagtcacttcatttcccgtacaaaccacagactcg
ttctctccctcgtctctcggtagttttggtattccagttggaggaggaaactctgtcagt
ggagctgttgatatgtttggattctctactaattcttccaccaacccgtcagcagtcact
gattcaatgtcatcactgaaagagatcacgacagaggcaatacttacccacggactcctt
aacgagaataaaagaaatacttcggatcaaaacttaagagcattactcaatccatcagct
gcccctggctcacgtttagatgctgccctaagtctagggacttcaaccaccagttccctc
cctagagatgccacgcccattcagcctctactgggtgtggcccccctgggaccaatttcc
ctcgggcaggacaaggtttatcaattgagaatgttagagtcggcttataagcacatgccc
gaaccctcagactctgaaaaagtcaggccgtacctccagagaacgccgtaccctacccca
ccataccatcctcagcactcaccctctcatatggactcttatgacttttaccaaagactc
tccattgaaacactcttcttcatattctattacatggagggtaccaaggcacagtacatg
gcagctaaagctctcaagaagttgtcctggagattccatacaaaatatatgacctggttc
cagagactggaggaacctaacaccatcactgatgattatgaaatgggaacttacatctac
tttgattatgagaagtgggcacagagaaagaaggatggattcacctttgagtacagatac
cttgaagacagagacctcccatga
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