Amphimedon queenslandica (sponge): 100638519
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Entry
100638519 CDS
T02284
Name
(RefSeq) transcription factor SOX-21-like isoform X2
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aqu03000
]
100638519
Transcription factors [BR:
aqu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100638519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
100638519
NCBI-ProteinID:
XP_011404993
UniProt:
A0A1X7UIP5
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MTIMSRAPDHIKRPMNAFMVWSKERRKELAQENPRMHNSELSKKLGAEWKALSDTSKHRY
IEEAKKIREQHMAEFPHYRYRPRRKPKNPFKAGGGGGSGRMSVASTPYSLSSLSPGSTGS
TSSNCSSSTNTASDAAGFVGPHQVQILPQQVVTSHGLHHSPIATTTNFIQSLQPAASIAG
GGTTYLIQRQPLLPAGTQIIQTATPIIQLAHPSHLTSSPHQLVPLIQAASGTHAGMHPTD
GAKQGGQTILIKMDAGTPHQVISPSYITAAAAAGNRPSEQHCEVVEYSHHKQDIIDQDES
SSSSLSAQSTPTSKTTPVIVSEIKSHSTPQVNSPSSSLLPPLLIPGGQAGVNVLMQHAGG
AQALQGQQPGVVTVGTGGSPHHHIGALRSAEIPYRVYPDLSSMPLCLVPVVDQASPGSNY
TGSR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaccattatgtctagagcaccggatcatatcaagcgaccaatgaacgccttcatggtg
tggtcgaaagagagacgcaaggagctagcccaggagaaccctcggatgcacaactctgag
ctgagcaaaaagctgggcgccgagtggaaagcactctctgacaccagcaagcatcgttac
atagaggaggcaaagaagatccgcgagcaacacatggcggagttcccgcactacagatac
aggccgaggaggaagcctaaaaacccattcaaggctggaggaggtggtggaagtggaagg
atgagtgttgcaagcacaccttactctctatctagcctctctcctggctcaactggtagc
accagctcaaactgcagtagctccaccaacactgcatctgatgctgcaggctttgtagga
ccacaccaggttcaaatactcccccagcaagttgttactagtcatggtctacatcactca
ccaattgcaactacaaccaatttcattcaaagcctccagccagcagcttcgattgctgga
ggaggaacgacgtacctcattcagagacaacccctacttccagctggtacacagatcatt
caaactgcaacaccaatcatacagctagctcatcctagccatctgacctcttcgcctcat
cagctcgtacctttaatacaagcagcaagtgggacgcatgctggaatgcatccgactgat
ggggccaagcaaggcgggcagacgatcctcattaaaatggatgcaggcacaccacaccaa
gtgatatcgccaagttacataacagcagcagcggcggcaggtaatagacccagcgagcag
cactgtgaagtggtggagtattctcaccataagcaagatatcattgaccaggatgagtcc
tcctccagctctctctctgcacaatctacgcccacgtctaaaacaactcctgtcatagtc
tctgagataaagagtcactctacacctcaagtcaactccccttcttcctcgcttctccct
ccgttactcataccaggtggacaagctggagtcaacgttctcatgcagcacgctggagga
gcacaggctctacaaggacagcagcctggagtggtgactgtgggaaccggaggatcacca
caccaccacattggtgcactgagatctgctgaaatcccctacagggtatatccagactta
tccagcatgccactgtgtctcgtgccagttgtggaccaggcaagcccggggtcaaattat
acagggtcaagatag
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