Amphimedon queenslandica (sponge): 100638662
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Entry
100638662 CDS
T02284
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100638662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100638662
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100638662
mRNA degradation factors
5'-3' decay
Lsm complex
100638662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Seadorna_VP6
Motif
Other DBs
NCBI-GeneID:
100638662
NCBI-ProteinID:
XP_003391415
UniProt:
A0AAN0IJP4
LinkDB
All DBs
Position
Unknown
AA seq
151 aa
AA seq
DB search
MEGHGVQTDLQAKDSFDGKYIPGTASLIAEVDKRILVVLRGGRTLIGYLRSIDQFANLLL
QDTVERIHVGKKYGDIPRGIFLVRGENMVLCGEIEKSLEESMELEKVSIEEIIEAQRQEN
EKREKENKRKEELLRQKGLPVVRDESEDILS
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcatggggttcagacagatcttcaagcaaaagacagttttgatggtaaatac
ataccaggaacagccagccttatagcagaagtcgacaagcgtatattggttgtgttaaga
ggagggaggacattgataggatacctcaggagtattgatcaatttgcgaatctgttgttg
caagacactgttgaacgcattcatgtcggaaagaaatatggagatatacctagaggaata
tttctagtcagaggagaaaacatggtcctctgcggagaaatagagaaatcacttgaagaa
agcatggaactggagaaggtctcgatcgaggagattattgaggcacagagacaagaaaac
gagaagagagagaaagagaacaagagaaaagaggagctattacgacagaaaggacttccc
gtcgtgagagacgaatctgaagatattctgtcatga
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