Amphimedon queenslandica (sponge): 100638901
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Entry
100638901 CDS
T02284
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100638901
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100638901
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100638901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
zf-C2H2_DHX34
HA2_C
DEAD
AAA_22
HA2_N
ResIII
ATPase
nSTAND3
AAA_7
AAA_16
Rad17
AAA_29
Rpr2
Motif
Other DBs
NCBI-GeneID:
100638901
NCBI-ProteinID:
XP_019852260
UniProt:
A0A1X7UVC6
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MGGAKLYTCIVMDWSKQEKDLDRIFFKNFSLIQRGSQEHKDFWKFFYRYQKFNASKEKTK
AEKNVEWSASSEGESSKDPFSFPPVYDRSHRICFNVETDNLEYQLRVLQQRREDERKKSS
PLTLKHLLEFRSVIRHFLNFQQKTKFQRIQKIIRDQSELPIYQFKDQILSAVRDNQVVLI
AGDTGCGKSTQVPQYLLRGSYEKIACTQPRRIACLSLAKRVSYETLNEYRTEIAYQVRFE
RSRTPATKVLFLTEGLLLRQLSTDRDLSRYDVIIIDEVHERHINSDFLLGVLRILIDQRS
DLKLILMSATINISLFSDYFQGAPVIKVPGRLYPIDLQYMPISNASVLQPTAQKSSKLDP
QPYLRILQLIDNKYPRSERGDVLVFLSGMNEIASLLHEVKSYGEATGRWIGLPLHSALSI
EEQDKVFDVAPDGTRKCIISTNIAETSITIDGIRFVIDSGKVKEMGYDSHTKMNRLQEFW
ISQASSEQRKGRAGRTGPGVCFRLYSESDYSSFPEYATPEIQRVPLESLVLQTIALDLGN
IRKFPFIESPSLSSIETSVAFLKEQDALTNDERLTPVGKMLAQLPVDVVIGKMLIMGSLF
HVIEPVLIIAAGLSVQSPFTQTAFNQDESSAQSTRQSLESDHGDPYTLLNAFDEWINVKR
DGVKASSQWCKRRGIEEQRLYEMVKLRQQFRDVLLDHELLEREFHEASGEEEERERKSRW
FQLSEVQQEELRSMRKRHRTENKQRKVLKMDHEVDEEEEVSIAAGLKHLEFKLLHDLSQL
QDGSSERRSYSLRDINLLKIVICSGLYPQVAIGDDCNTFKKGSEQIFHTKSKSFLVLHPT
SVFSSNPDLLFQQQEGGKKVHYLLAYEKLLETNRPYMVNALKVPALQTLLLFTQSIDTNE
SCSRLVVDEWLEIVFTGEDTGQEVMSIVQTLRGTWSRILEMKLAKKSKRDDEDDDQGRES
DEIQSLERLLGSRLAEFLDSDYNYTLSQISSSIRPHLYKGPSSTSTTSGGEGGGTKGLPG
KLTVGSSKSSPSPHPTKGGFMITHYFTYDCLVDPSQAEASSSLSQHLRNVWVCPSCHQSL
VVNMAEQLSHRGECEIEQQAKRKEEKRKEEERAVINTREYHCKECDRVFQFTSIEILRHK
RQHKQN
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggctaagttgtacacgtgtattgttatggactggagcaaacaagagaaagat
ttggatcgtatcttttttaaaaacttcagtctcatacaaagggggtcacaagaacacaaa
gatttttggaaatttttttatcgatatcaaaagttcaatgccagtaaagaaaagactaaa
gcagaaaaaaatgtagaatggtccgcgtccagtgaaggagagagttcaaaagatccattc
tcatttcctccagtgtacgacaggtctcacagaatatgcttcaatgtggagactgataac
ttagagtatcagttgagagttctccagcagaggagggaagacgagaggaagaaaagttct
ccattgacgctaaagcatttgcttgaattccgctctgtcattcgtcactttcttaacttt
cagcagaagacaaagttccagaggattcaaaagataatacgagatcagtccgaactacca
atttaccaattcaaggatcaaatactgagcgctgtcagggataatcaggtcgtattgatt
gctggtgacactgggtgtggcaaatcaacacaagtaccgcagtacttactaagagggtct
tatgagaagatagcttgtacccagccgaggagaatagcttgcctttctcttgctaaacgt
gtgagctatgagactctgaatgagtatagaactgagatagcgtatcaggtcaggtttgaa
cgatcaagaacacctgctactaaagtactcttccttactgaaggtcttttgctacgtcag
ttaagcactgatagagatctcagtcgttatgatgtcatcataattgacgaagtccatgag
cgtcacattaacagtgatttccttctcggcgtattaaggatcctcatcgatcagagatct
gatcttaagttgattttaatgtcggcaacaatcaacatttcgttattttccgattatttt
caaggagccccggtcataaaggttccaggtagattgtatcctattgatttgcagtatatg
cctatcagtaatgcatctgtactgcaaccaacagctcagaagagttcaaagttagatcca
cagccttacctaaggatattacaattaattgataataaatatcccagatcagagagaggg
gatgtactggtattcctcagtggtatgaatgagattgctagtttacttcatgaagtcaag
tcttatggtgaagccactgggaggtggattggtctcccattacatagtgcactatccatt
gaagagcaagataaggtgttcgatgttgctcctgatggtacaaggaagtgtattatatct
actaatatagcagagacctcaattaccattgatggaattagatttgtcattgattccggg
aaagtgaaagagatgggttatgactcacatacgaagatgaacaggttgcaagagttttgg
attagtcaggccagctctgagcagaggaagggaagagctggtcgtactggtcctggtgtg
tgtttccggttatattcagagtcggactattcctcattcccagagtatgcgactccagag
atacagagagtccctcttgagtcactcgtactccagaccattgcactcgacctggggaat
attaggaagttcccattcattgaatctccttcattatcaagtatagagacttcagtagca
ttccttaaggaacaagatgctcttacaaatgatgaaagactgactccagtgggtaagatg
ttggctcagttaccagttgatgtggtcattgggaagatgctcattatgggctctctgttt
catgtgatagagccagtattaatcatagcagctggtttaagcgtccagtctccatttaca
caaacagcattcaatcaggacgagtcttcagctcagtccacaagacagtcacttgagtct
gatcatggagacccttatactttgctcaatgcgtttgatgaatggattaatgtgaagaga
gatggagtcaaggcttcctctcaatggtgcaagaggagagggattgaggagcaaagacta
tatgagatggtaaagttgaggcagcaattccgcgacgtacttttagatcacgagttattg
gagagagagtttcacgaggcaagtggagaggaggaggagagggagagaaagagcaggtgg
ttccaactgtcagaggtacagcaagaggagctgaggagcatgagaaagagacacagaact
gagaacaagcaaagaaaagtacttaaaatggaccacgaggttgacgaagaggaagaagta
tccatagcagctggactgaagcacttggaatttaaattactccatgatctctctcaattg
caggatggatccagtgagaggagatcctacagtttgagagacatcaatttattgaagatt
gtcatatgtagtggactgtatcctcaggttgccatcggtgacgattgtaacacgttcaaa
aaaggttccgaacaaatattccataccaaatccaagtcattcctagtccttcatccaact
agtgtcttctcttctaatcctgacctccttttccagcaacaagaaggaggaaagaaggtt
cactacttactggcgtacgaaaaattactcgagaccaatcgaccatatatggtgaatgct
ctaaaagttcctgccttacagactctgctattgttcactcaatccattgacacaaacgaa
tcatgttcaaggttagtggttgacgaatggttagagatagtgttcactggcgaggacact
ggacaagaggtaatgtccatagtacagactctaagaggcacctggtcacgcatactagag
atgaaactagctaagaaaagcaagagagatgatgaagatgatgatcaaggtagagaatcc
gatgagatacaatcgctcgagaggcttttaggttctcgtttagctgagttcttggactct
gattataattacactttatctcaaatctcttcatcaatacgtccgcacctttacaaagga
ccttcttcaaccagtacaacatctggaggagaaggaggaggaacaaaggggctaccagga
aaattaactgttggctcttcaaagtcatctccttcaccccaccccacaaaaggcggtttt
atgattacccattattttacttatgactgtctagttgatccgagtcaggccgaggcctcc
tcctccctcagtcaacacttgaggaatgtatgggtctgtccttcctgccaccagtcgcta
gtggtcaacatggcagagcagctgtcccacagaggagaatgtgaaattgagcagcaagca
aaacggaaagaggagaagaggaaagaagaggagagagccgtcatcaatacaagagagtat
cactgcaaggagtgtgatagagtgtttcaattcacgtccattgaaatactaagacacaaa
cggcagcataaacagaactaa
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