Amphimedon queenslandica (sponge): 100638976
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Entry
100638976 CDS
T02284
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aqu03009
]
100638976
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100638976
Ribosome biogenesis [BR:
aqu03009
]
Eukaryotic type
90S particles
Helicases
100638976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
T4SS-DNA_transf
AAA_19
Motif
Other DBs
NCBI-GeneID:
100638976
NCBI-ProteinID:
XP_011403370
UniProt:
A0A1X7V3N8
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MVDSQDIFRKLTRGIKFNRDKQPLELRPNKTKEESDSHDLYSKRKRLVSSALDFFGDTES
ATDDVREEPDDTGSVTMLLGKRSRSKVEKEATLSDCEVKSSLTFSDYEDTSVQLTSSQSV
STDSRPKKKKKRKSKMSSAASLRMEEINRFRNSNRIYVSGSDVPDPIRTFSDLSEQYSIP
PYLMKNITSLGYNDPTPVQMQTIPLLLHSHEVLVCAPTGSGKTAAFLVPILTLLKSPRRV
GFRAVIVSPTRELAQQTYRECVRLSSGSGFSIHVLTKATASANSFGPQSSLKFDILVTTP
NRLVHMLSLDPPGIVLDNVEWLILDECDKLFEDGVTGFKDQIDEIFTACSNPNIKRGLFS
ATLASGVEEFSRAHFDNFVRVIIGLQNSATETIKQQLLYVGQETGKLLAMRDIIHKGFTP
PVLVFVQSIERAKELFHELIYDGMNVDVIHSERTQAQRDNVIKSFREGKIWILICTDLMG
RGIDFKGVNLVINYDFPQSSVSYIHRVGRTGRAGRVGEAITFFTEEDTAYVRSIANVMKS
SGCPVPDWMLEMRNPSKNQKKALSRKPVKRRSIKTVSKYDLEKARIKRQKFSRKTT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtggacagtcaagatatctttaggaagctaactagaggaatcaagttcaacagagac
aagcagccattggaattaagacctaacaagacaaaggaggaatctgactctcatgatctg
tacagtaaaagaaagagacttgtctcaagtgctttggacttttttggtgacactgaatca
gccactgatgatgtaagggaggaaccggatgacacaggatcagttacaatgttactagga
aagagatcaagaagtaaagtagagaaagaagctacattgagtgattgtgaagtgaagagc
tcactgacattcagtgattatgaagatacgtcagttcaactcacttcaagccaatcggta
tcaacagactccaggcccaaaaagaaaaagaaaagaaaaagtaaaatgtcttctgctgct
tcactgaggatggaagagattaataggtttcgtaactccaataggatatatgtcagtggc
tctgatgtacctgatccgattagaacatttagtgatttatctgaacagtactctattcct
ccttatctaatgaagaatattacaagtcttggatacaatgatccaactccagtacagatg
cagacaattcctcttctcttacatagtcatgaagttctagtgtgtgctcctaccggctct
ggaaaaacagcagccttcctagttcccattctaactcttttaaaatctcctcgcagagtt
ggatttagggccgtcattgtgtcccctactagagaattggcccaacagacatacagagag
tgtgttaggctaagttctggatcaggattcagtattcatgtattgaccaaagccactgct
tcagctaacagctttggacctcaatctagcctcaagtttgacattttagttactactcct
aatagactagtccacatgctgtcactggatcctcctggcatagtactggataatgtagag
tggctcatattagatgagtgcgataaattatttgaagatggcgtaactggatttaaggat
cagattgatgagatattcactgcctgttctaatcctaatatcaagcgaggcttgttcagt
gccacattagcctccggcgtagaagaattctcccgagcacactttgacaatttcgttcga
gtgattattggactacagaactctgcaactgagactattaagcaacagcttctctatgtt
ggccaagagactgggaagctattggctatgagggacatcatacataaaggattcactcca
ccagtgttggtgtttgttcaaagcattgaaagagcaaaggagttgtttcacgagttgatt
tacgatggaatgaatgttgatgtgattcattctgagaggactcaggcacagagagataat
gttatcaaaagctttagggaaggaaagatttggatacttatttgtactgacctcatggga
agaggaattgacttcaagggagtcaatctagtcattaattatgatttccctcaatcatct
gtcagttatatacacagagttggaagaacagggagagctggaagagttggggaagctatc
acctttttcacagaagaagacacagcttatgttagaagtatagctaacgtcatgaagagc
tctggctgccctgttcctgattggatgcttgaaatgagaaatccatccaaaaatcaaaag
aaggctttgtcacgaaagccagtaaagagacgtagcattaaaacagtatcaaagtatgat
ttggaaaaagctagaatcaaaaggcaaaaattttccagaaaaactacttga
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