KEGG   Amphimedon queenslandica (sponge): 100639756
Entry
100639756         CDS       T02284                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100639756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aqu03041]
    100639756
Spliceosome [BR:aqu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    100639756
SSDB
Motif
Pfam: WD40_Prp19 WD40 EIF3I WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_DCAF4 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_SCAP Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_Nup120_160 WD40_like WD_LRWD1 Beta-prop_HPS5 Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 100639756
NCBI-ProteinID: XP_011407726
UniProt: A0AAN0IQP8
LinkDB
Position
Unknown
AA seq 193 aa
LLLLLLFSYDKSWRLIDLEYNTEILHQEGHSRSVYDIQFHTDGGLVGTSGMDSCARIWDL
RSGKCLMVLQGHLNNVLSVDFSPNGYHFITGSDDHSVRVWELRRRRCIYQLPAHTNLVSK
LKFERNRGDFFVSSSYDNTAKIWGHPGWTPLQTLAGHESKVMCVDLSPDQQYIATGSFDR
TFKLWERQSTDVM
NT seq 582 nt   +upstreamnt  +downstreamnt
ttgttgttgttgttgttgtttagttatgataaatcatggagattaattgatttagaatat
aacactgaaatattacaccaggagggtcattcaaggtcagtctatgacattcagttccac
actgatggaggactagtgggtactagtggtatggactcctgtgctcgtatatgggacctg
aggtcagggaagtgtctaatggtgttacagggacacttgaataatgtcctctctgttgac
ttctcacctaacgggtatcactttatcactggttctgatgatcatagtgttcgggtttgg
gagttaagacgaagaagatgcatttaccaactgcccgcccacactaatctggtctcaaag
ctcaaatttgagagaaatagaggagacttctttgtgtcttcgtcttatgataacacagca
aaaatttggggtcacccaggttggactccattacaaaccctcgccggccatgagagcaag
gtgatgtgtgtggacttatctccagaccagcagtacattgctacaggctcttttgacagg
acattcaaactatgggagagacagtcgaccgatgtcatgtga

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