KEGG   Amphimedon queenslandica (sponge): 100639873
Entry
100639873         CDS       T02284                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
aqu  Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aqu03041]
    100639873
Spliceosome [BR:aqu03041]
 Complex B
  Other components
   Complex B specific factors
    100639873
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd LisH_TPL ANAPC4_WD40 WD40_Gbeta Beta-prop_VPS8 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_BBS7 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_IP5PC_F GerA Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 DUF7165 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 LisH_WDR26 LisH_PAC1 zf_topless PROPPIN
Other DBs
NCBI-GeneID: 100639873
NCBI-ProteinID: XP_019855370
UniProt: A0AAN0JEC8
LinkDB
Position
Unknown
AA seq 415 aa
MVIIYKMALEIESADVIRLIQQYLKENNLQRSLLTLQEETGISLNTVDSIESFVSDISKG
HWDAVLQAIQSLKLPDKTLIDLYEQIVIELIELRELGAARSLLRQTDPMIMLKQQQPERY
IHLENLLARSYFDPREAYTNGSSKEKRRAAIANALSGEVSVVPPSRLLALLGQSLKWQQH
QGLLPPGSTIDLFRGRAAMRDSEEEKYPTLLNKTIKFGTKSYPQSAVFSPDGQYLVTGSA
DGFIEVWNFTTGKIRKDLKYQAQDSFMMMDDAVLCLSFSRDSELLASGAKDGRIKVWKVS
TGQCLRRFEHAHNESVTSVSFSKDSSQILSCSNDMSIRYGKREGGDFVASLLSPRGDWVY
CVGEDHVLYCFSLTTGKLEQTLMTHDKEVIGLAHHPHQNLIATFAADGKLKLWKS
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggtaattatttataaaatggctcttgaaatagagagtgcagatgttataagattaata
caacaatatctaaaagaaaacaacctccaaagatcactacttacactacaagaggagact
ggtatatctctcaatacagtggattctattgaaagttttgtgtcagatatcagtaaagga
cactgggacgctgttcttcaagccattcagtctctgaaactaccagacaaaacattgatt
gatctttatgaacagatagtgattgagttgattgagttaagagaattaggggccgcccgt
tccttactgagacaaactgatccaatgataatgctgaaacagcaacagccggagcgatat
atacacctggagaacctgctggcaagatcttactttgacccgagagaagcttacactaat
ggaagtagtaaagagaagagaagagctgctatagctaatgcattatctggtgaagtgtca
gtagtgcctccgtcaaggttactggcactgttaggtcagtccttaaaatggcagcagcac
caggggctactgccacctggttcaacaatcgatctattcagaggtcgtgctgctatgaga
gattcagaagaggagaagtatccaacgttacttaataaaaccataaagtttggaactaag
tcgtacccacagtccgcagtcttctcaccagacggacaatacctggtcactggtagtgct
gatggtttcattgaagtttggaacttcactaccggaaaaataaggaaggatttgaagtat
caggcacaagatagtttcatgatgatggatgatgctgtcctttgtctgtcattcagtaga
gacagtgaactcttggcatctggagccaaggacggaagaataaaagtttggaaagtctcc
actggtcagtgtctaaggcggtttgaacacgcccacaatgagagtgtgacgtcagtctcc
ttctctaaggacagcagtcaaatattgagctgctcaaatgacatgagcatcaggtatggg
aagagagaaggaggggattttgtggcgtcactcctcagcccaagaggagactgggtctac
tgtgtgggggaggatcatgtactgtattgcttttcattgactactgggaaactggagcaa
acactaatgacacacgataaagaagtcattggtttggctcatcatcctcatcaaaacctc
atagcaacttttgctgctgacgggaaactgaagctatggaaatcttaa

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