Amphimedon queenslandica (sponge): 100640220
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Entry
100640220 CDS
T02284
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100640220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100640220
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100640220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Phage_AlpA
Motif
Other DBs
NCBI-GeneID:
100640220
NCBI-ProteinID:
XP_003391353
UniProt:
I1EJB6
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MDRLIKLYPLSNYTFGTKEPLYEKDRTVESRFLRLKEDYEKTGMRRSVDGVVLVHEHNLP
HVLLLQLGSTFFKLPSGEVGPGESEAEGVQRIVNDTLGKEDTPLSTWIVEDVVANWWRPN
FESPQYPYIPAHCTHPKEHKKLFLVQLPERTMFHVPRNYKLVAAPLFELYDNSAGYGPVI
AGLPQNLSRFNFIYI
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggacagactaatcaagctataccctctttcaaactacacctttggtaccaaagagcct
ttgtatgagaaggacaggacagtggagtcacgtttcctccgtctcaaggaagactatgag
aagacaggaatgagaagaagtgttgatggagtagtactagttcatgaacacaatctacct
catgtactgctcctacagttaggtagcacttttttcaaacttccatcaggagaggttggc
ccaggagagagtgaagcagagggtgtccaaaggattgttaacgataccctgggcaaagaa
gacactcctctctcaacctggatcgttgaagacgtagtcgccaactggtggagaccaaac
tttgaatctccacaatatccgtacataccagcacactgcactcaccctaaggagcataag
aagttatttcttgttcagttaccagaaaggacaatgttccatgttcctcgaaactataaa
cttgttgctgctcctttgtttgaactgtatgacaactctgctggttatggaccagtcata
gctggtctcccacaaaacttgtctcgatttaatttcatttatatttaa
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