Amphimedon queenslandica (sponge): 100640254
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Entry
100640254 CDS
T02284
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100640254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100640254
Spliceosome [BR:
aqu03041
]
Complex A
Other components
Complex A specific factors
100640254
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
zf-CCHC_3
zf-CCHC_5
KH_KRR1_2nd
KH_PNO1_2nd
Rhodanese_C
Motif
Other DBs
NCBI-GeneID:
100640254
NCBI-ProteinID:
XP_019855951
UniProt:
A0A1X7U6C5
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MATGANSTPLGRLHPILQGRQGSTPSTALGSKAALENSDLQAHLNAAKKAASALFSKSEN
TDGPPAKKRKRSRWGGEETRTVIPGMPTVIPPNMSEGQQKLYLIHLQVEDYTRRLRTDDL
GIPINPADRSPSPEPVYSHDGKRLNVREVRVRKKLEDSRHSLIQEALKLNPTYKPPVDYR
PPAQKFEDKVFIPQEDHPLTNFVGLIIGPRGNTLKTLEKETNCKIMIRGKGAAKEGKFNR
LGVPQPGEDEPLHALVSASTLEDLKIGVDKIKSIVKSGIDNPGNENDLKRQQMMQLAELN
GTYRPLDVLTCRNCGSLSHRTWECSEGQNVTSTIICSKCGGGGHIASDCKVDLLKDGGEL
SVTERAKMDSEYQSLMKELGEPVPASARGGGAQIPPPPGLVGAPVPVDPNNPWGAAVGPG
GQPLPVIPYPLMIPMAAAPWMPVPVVSTPEPTVPFSIPQSNRPAPPTSQDVAAWTAPKLQ
NSNASMAPPLPNSAPPLPNEAPPPPPPDHAPPPPPIEPPPPPPAPF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggctactggtgctaattccacgccacttggtcgccttcatcccatccttcaaggaaga
caggggtctaccccatcgactgctcttggttctaaagccgccctagagaacagcgaccta
caggctcacctcaatgccgccaaaaaagccgcttcggccttgttttcaaaatcagagaac
actgatgggcctcctgctaaaaagaggaagaggagcaggtggggaggggaagaaactcgc
actgtcataccaggaatgcccactgtgataccacctaacatgtcagaaggacagcaaaaa
ttatacttgattcatttgcaagttgaggattacacgagaagactcagaactgatgatcta
gggatacctatcaatcctgctgacaggtcaccatccccagagcctgtgtacagtcatgat
ggtaagagacttaacgtaagagaagtgagagttaggaagaagcttgaggacagcagacac
tccttgatacaagaggcactgaagcttaacccaacctataagccgcctgtggattacagg
cctcctgctcaaaagtttgaagataaagtgtttatacctcaagaagaccatccattgact
aacttcgttggtttgatcatcggtcctcgtggaaacactcttaaaacacttgagaaagag
actaactgtaagatcatgataagaggcaaaggagccgctaaagaaggaaagtttaatcgt
cttggagtaccccagccaggagaagatgagcctctacacgccctcgtgtctgcttcaact
cttgaagaccttaaaataggagtggacaaaataaagagtatagtcaaatctggcattgat
aatcctgggaatgagaatgacctgaagagacaacaaatgatgcaattagctgaactaaat
ggaacgtacaggcctttggatgtactcacatgtcgtaattgtggttctttgtctcatcgt
acttgggagtgctcggagggtcaaaacgtcacgtccacaataatttgtagcaagtgtgga
ggaggcggccatattgcttccgactgcaaagtagaccttttaaaagatggtggagaacta
tctgtgactgaacgagcaaaaatggacagcgaatatcagtcattgatgaaggagttaggt
gagccagttccagcttcagctagaggaggaggagcacagataccaccaccaccgggactg
gtgggtgccccagtaccagttgatcccaataacccctggggggcagcagtgggccctggg
ggccaacctctaccagttataccatatcctttaatgataccaatggcagctgctccatgg
atgccagtccctgttgtgtccactcctgaaccaacagttcctttctccattcctcaatcc
aacagaccagctccgcccacttcacaagatgttgctgcttggacggctccaaagcttcag
aatagcaatgcttcaatggctccgcctcttcctaacagtgccccgccccttcccaacgag
gctcctcccccaccacctcctgatcatgccccgcctccacctcctattgagccacctccc
cctcctccagctcccttctaa
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